WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  RNA-seq count data were filtered for detected genes (> 10 counts across all samples) and analyzed using DESeq. 2 with Cook's cutoff filtering set to FALSE. Genes were counted as differentially expressed if they registered a Benjamini-Hochberg corrected p-value less than 0.05 and a log2-fold change greater than 1.2 between any pair-wise conditional comparison. Description  Genes that are up-regulated in elt-2(ca15) larvae compared to elt-2(ca15);elt-7(tm840) larvae.
Primary Identifier  WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_upregulated

0 Anatomy Terms

210 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
WBGene00000795 crn-2 CD4.2 Caenorhabditis elegans
WBGene00001059 dpf-6 F44B9.1 Caenorhabditis elegans
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
WBGene00001136 eat-5 F13G3.8 Caenorhabditis elegans
WBGene00001410 feh-1 Y54F10AM.2 Caenorhabditis elegans
WBGene00001772 gst-24 F37B1.1 Caenorhabditis elegans
WBGene00001794 gta-1 K04D7.3 Caenorhabditis elegans
WBGene00002024 hsp-43 C14F11.5 Caenorhabditis elegans
WBGene00002124 inx-2 F08G12.10 Caenorhabditis elegans
WBGene00002271 lec-8 R07B1.10 Caenorhabditis elegans
WBGene00003375 mlp-1 T04C9.4 Caenorhabditis elegans
WBGene00003485 mua-6 W10G6.3 Caenorhabditis elegans
WBGene00003524 nas-5 T23H4.3 Caenorhabditis elegans
WBGene00003544 nas-25 F46C5.3 Caenorhabditis elegans
WBGene00003589 nex-2 T07C4.9 Caenorhabditis elegans
WBGene00003657 nhr-67 C08F8.8 Caenorhabditis elegans
WBGene00003893 ost-1 C44B12.2 Caenorhabditis elegans
WBGene00003991 pfn-3 K03E6.6 Caenorhabditis elegans
WBGene00003998 pgp-4 F42E11.1 Caenorhabditis elegans
WBGene00004052 parg-2 H23L24.5 Caenorhabditis elegans
WBGene00004144 srlf-35 R11G11.7 Caenorhabditis elegans
WBGene00004153 pqn-71 T23F1.6 Caenorhabditis elegans
WBGene00004370 rig-3 C53B7.1 Caenorhabditis elegans
WBGene00004405 rop-1 C12D8.11 Caenorhabditis elegans
WBGene00004764 sel-7 K04G11.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015981 elt-7 C18G1.2 Caenorhabditis elegans

0 Regulated By Molecule