WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed genes were estimated using a General Linear Model approach, negative binomial distribution, and a quasi-likelihood F-test. Genes with a P-value < 0.05 and fold change > 1 were considered significant. Description  Transcripts that showed significantly decreased expression in H3.3 null mutant animals (FAS43 [his-69&his-70(uge44) III; his-72(tm2066) III; his-74(uge18) V; his-71(ok2289) X]) comparing to in N2 animals at L1 larva stage.
Primary Identifier  WBPaper00054191:H3.3(null)_L1_downregulated

0 Anatomy Terms

270 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000372 cyp-13A7 T10B9.10 Caenorhabditis elegans
WBGene00000454 ceh-33 C10G8.7 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000621 col-44 F54B11.2 Caenorhabditis elegans
WBGene00000628 col-51 T28F2.8 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000634 col-58 F26B1.4 Caenorhabditis elegans
WBGene00000641 col-65 K08C9.4 Caenorhabditis elegans
WBGene00000649 col-73 F11G11.12 Caenorhabditis elegans
WBGene00000653 col-77 M195.1 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000682 col-108 Y41D4A.2 Caenorhabditis elegans
WBGene00000689 col-115 Y42H9B.1 Caenorhabditis elegans
WBGene00000699 col-125 C29F4.1 Caenorhabditis elegans
WBGene00000704 col-130 F08G5.4 Caenorhabditis elegans
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans
WBGene00000729 col-156 F57B7.3 Caenorhabditis elegans
WBGene00000735 col-162 Y2H9A.3 Caenorhabditis elegans
WBGene00000740 col-167 T10E10.2 Caenorhabditis elegans
WBGene00000742 col-169 T10E10.5 Caenorhabditis elegans
WBGene00000753 col-180 C44C10.1 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000981 dhs-18 C45B11.3 Caenorhabditis elegans
WBGene00000986 dhs-23 R08H2.1 Caenorhabditis elegans
WBGene00001389 far-5 F15B9.3 Caenorhabditis elegans
WBGene00001500 ftn-1 C54F6.14 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024

0 Processes

5 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001943 his-69 E03A3.3 Caenorhabditis elegans
WBGene00001944 his-70 E03A3.4 Caenorhabditis elegans
WBGene00001945 his-71 F45E1.6 Caenorhabditis elegans
WBGene00001946 his-72 Y49E10.6 Caenorhabditis elegans
WBGene00012276 his-74 W05B10.1 Caenorhabditis elegans

0 Regulated By Molecule