WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression was calculated by empirical Bayes method using the eBayes function, and control of FDR was employed as the multiple testing correction. Genes with a false-discovery rate (FDR)-corrected P value of <= 0.05 and an absolute fold change greater than or equal to a cutoff of 1.5 on a log2 scale were called differentially expressed. Description  Genes down regulated by nasp-1. This experiment compares nasp-1 mutant versus N2 strain in C. elegans, after both have been exposed to the pathogenic bacteria B. thuringiensis DB27.
Primary Identifier  WBPaper00044013:nasp-1_downregulated

0 Anatomy Terms

242 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000545 clp-4 Y39A3CL.5 Caenorhabditis elegans
WBGene00000556 cnc-2 R09B5.3 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00001366 exc-5 C33D9.1 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001500 ftn-1 C54F6.14 Caenorhabditis elegans
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00002067 ifp-1 C43C3.1 Caenorhabditis elegans
WBGene00002187 kgb-1 T07A9.3 Caenorhabditis elegans
WBGene00002188 kgb-2 ZC416.4 Caenorhabditis elegans
WBGene00003092 lys-3 Y22F5A.6 Caenorhabditis elegans
WBGene00003511 mxl-3 F46G10.6 Caenorhabditis elegans
WBGene00003589 nex-2 T07C4.9 Caenorhabditis elegans
WBGene00003602 nhr-3 H01A20.1 Caenorhabditis elegans
WBGene00003640 nhr-50 C06C6.5 Caenorhabditis elegans
WBGene00003648 nhr-58 R11G11.2 Caenorhabditis elegans
WBGene00003702 nhr-112 Y70C5C.6 Caenorhabditis elegans
WBGene00003767 nlp-29 B0213.4 Caenorhabditis elegans
WBGene00003769 nlp-31 B0213.6 Caenorhabditis elegans
WBGene00003844 odc-1 K11C4.4 Caenorhabditis elegans
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
WBGene00004000 pgp-6 T21E8.1 Caenorhabditis elegans
WBGene00004001 pgp-7 T21E8.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007500 nasp-1 C09H10.6 Caenorhabditis elegans

0 Regulated By Molecule