WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ABplaaaaapp, ABarpapaapp according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Neuroblast_URX_CEPDx
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
embryonic cell ABarpapaapp   WBbt:0006075
embryonic cell ABplaaaaapp   WBbt:0006428

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000082 adt-1 C02B4.1 Caenorhabditis elegans
WBGene00000095 aha-1 C25A1.11 Caenorhabditis elegans
WBGene00000096 ahr-1 C41G7.5 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000193 arl-6 C38D4.8 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000241 bbs-1 Y105E8A.5 Caenorhabditis elegans
WBGene00000242 bbs-2 F20D12.3 Caenorhabditis elegans
WBGene00000244 bbs-8 T25F10.5 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000301 cav-1 T13F2.8 Caenorhabditis elegans
WBGene00000396 cdh-4 F25F2.2 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans
WBGene00000490 che-11 C27A7.4 Caenorhabditis elegans
WBGene00000492 che-13 F59C6.7 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans
WBGene00000865 cyb-1 ZC168.4 Caenorhabditis elegans
WBGene00000906 daf-10 F23B2.4 Caenorhabditis elegans
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
WBGene00001092 dro-1 F53A2.5 Caenorhabditis elegans
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans
WBGene00001118 dyf-2 ZK520.3 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00001121 dyf-5 M04C9.5 Caenorhabditis elegans
WBGene00001123 dyf-7 C43C3.3 Caenorhabditis elegans
WBGene00001127 dyf-11 C02H7.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule