WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ALML, ALMR, PLML, PLMR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:ALM_PLM
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4 Anatomy Terms

Definition Name Synonym Primary Identifier
Anterior lateral microtubule cell, touch receptor ALML lineage name: ABarppaappa WBbt:0003954
Anterior lateral microtubule cell, touch receptor ALMR lineage name: ABarpppappa WBbt:0003953
Posterior lateral microtubule cell, touch receptor PLML lineage name: ABplapappppaa WBbt:0004104
Posterior lateral microtubule cell, touch receptor PLMR lineage name: ABprapappppaa WBbt:0004103

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000377 cct-1 T05C12.7 Caenorhabditis elegans
WBGene00000378 cct-2 T21B10.7 Caenorhabditis elegans
WBGene00000379 cct-4 K01C8.10 Caenorhabditis elegans
WBGene00000380 cct-5 C07G2.3 Caenorhabditis elegans
WBGene00000381 cct-6 F01F1.8 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000450 ceh-28 K03A11.3 Caenorhabditis elegans
WBGene00000502 chp-1 Y110A7A.13 Caenorhabditis elegans
WBGene00000565 cnt-1 Y17G7B.15 Caenorhabditis elegans
WBGene00000621 col-44 F54B11.2 Caenorhabditis elegans
WBGene00000667 col-92 W05B2.6 Caenorhabditis elegans
WBGene00000689 col-115 Y42H9B.1 Caenorhabditis elegans
WBGene00000722 col-149 B0024.1 Caenorhabditis elegans
WBGene00000753 col-180 C44C10.1 Caenorhabditis elegans
WBGene00000775 cpin-1 F38E11.3 Caenorhabditis elegans
WBGene00001052 dop-1 F15A8.5 Caenorhabditis elegans
WBGene00001171 egl-2 F16B3.1 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001248 elp-1 F38A6.2 Caenorhabditis elegans
WBGene00001332 eri-1 T07A9.5 Caenorhabditis elegans
WBGene00001393 fat-1 Y67H2A.8 Caenorhabditis elegans
WBGene00001463 flp-20 E01H11.3 Caenorhabditis elegans
WBGene00001466 gpla-1 F58H1.4 Caenorhabditis elegans
WBGene00001488 frm-1 ZK270.2 Caenorhabditis elegans
WBGene00001512 gab-1 ZC482.1 Caenorhabditis elegans
WBGene00001553 gcy-33 F57F5.2 Caenorhabditis elegans
WBGene00001555 gcy-35 T04D3.4 Caenorhabditis elegans
WBGene00001618 glr-7 C43H6.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule