WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 82_1 with unidentified tissue expression pattern.
Primary Identifier  WBPaper00065841:82_1
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37 Anatomy Terms

Definition Name Synonym Primary Identifier
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
Interfacial (hypodermal) cells which connect the hypodermal epithelium of the lips to the pharyngeal epithelium, firmly binding the inner tissue (the pharynx) to the outer bodywall (the hypodermis). arcade cell   WBbt:0005793
Amphid socket cell, left AMsoL lineage name: ABplpaapapa WBbt:0003931
Tail ventral hypodermis hyp10 lineage name: ABplppppppp WBbt:0004378
Tail ventral hypodermis, 8th hypodermis cell hyp8   WBbt:0004381
Cylindrical hypodermal syncytium in head hyp1 lineage name: ABalpaapppa WBbt:0004694
Cylindrical hypodermal syncytium in head hyp2 lineage name: ABalpaapppp WBbt:0004692
Cylindrical hypodermal syncytium in head hyp5 lineage name: ABarpappap WBbt:0004685
Tail dorsal hypodermis hyp11 lineage name: Cpappv WBbt:0004377
Cylindrical hypodermal syncytium in head hyp3 lineage name: ABplaapaaaa WBbt:0004690
Cylindrical hypodermal syncytium in head hyp4 lineage name: ABarpapapa WBbt:0004687
Post-embryonic cell of pedigree TL.paa, phasmid sockets. PHso1L lineage name: TL.paa WBbt:0004112
Preanal hypodermis hyp12 lineage name: P12.pa WBbt:0004376
Cylindrical hypodermal syncytium in head hyp6 lineage name: ABarpaapaa WBbt:0004679
The outlet of the excretory sinus to the exterior environment through the cuticle, on the ventral side of the head, just behind the nerve ring. excretory pore pore WBbt:0005778
Inner labial socket ILsoDL lineage name: ABplaapaaap WBbt:0004521
Quadrant outer labial socket OLQsoDL lineage name: ABarpaaaaal WBbt:0004426
Inner labial socket ILsoL lineage name: ABalaaapall WBbt:0004518
Quadrant outer labial socket OLQsoVL lineage name: ABalppaaapp WBbt:0004424
Inner labial socket ILsoVL lineage name: ABalppapapp WBbt:0004503
adult vulval toroid cell, C, formed by fusion of precursors of lineage names P5.ppal, P5.ppar, P7.papl and P7.papr. vulC   WBbt:0006765
Interface between pharynx and hypodermis, form anterior part of the buccal cavity. anterior arcade cell arc ant WBbt:0005794
adult vulval toroid cell, D, formed by fusion of precursors of lineage names P5.ppp and P7.paa. vulD   WBbt:0006766
adult vulval toroid cell, B1, formed by fusion of precursors of lineage names P5.papa and P7.ppap. vulB1   WBbt:0006763
Interface between pharynx and hypodermis, form anterior part of the buccal cavity. posterior arcade cell arc post WBbt:0005795
adult vulval toroid cell, A, formed by fusion of precursors of lineage names P5.paaa, P5.paap, P7.pppa and P7.pppp vulA   WBbt:0006762
uterine toroidal epithelial cell. ut4   WBbt:0006788
Lateral outer labial sheath OLLshL lineage name: ABalpppaapd WBbt:0004443
Quadrant outer labial sheath OLQshDL lineage name: ABarpaaaapa WBbt:0004430
Inner labial sheath ILshDL lineage name: ABalaaaparr WBbt:0004533

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000493 che-14 F56H1.1 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000637 col-61 C01H6.1 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000645 col-69 K01A2.7 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000679 col-105 F58F6.2 Caenorhabditis elegans
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000687 col-113 C34D4.15 Caenorhabditis elegans
WBGene00000727 col-154 F55C10.2 Caenorhabditis elegans
WBGene00000746 col-173 F41C6.5 Caenorhabditis elegans
WBGene00000747 col-174 F46C8.2 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00000759 col-186 E03G2.4 Caenorhabditis elegans
WBGene00000778 cpn-2 D1069.2 Caenorhabditis elegans
WBGene00000902 daf-6 F31F6.5 Caenorhabditis elegans
WBGene00000969 dhs-5 F56D1.5 Caenorhabditis elegans
WBGene00000979 dhs-16 C10F3.2 Caenorhabditis elegans
WBGene00001074 dpy-13 F30B5.1 Caenorhabditis elegans
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule