WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 51 expressed in: Intestine anterior.
Primary Identifier  WBPaper00065623:51

6 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00006404 tag-10 C31C9.1 Caenorhabditis elegans
WBGene00007533 cbl-1 C12C8.2 Caenorhabditis elegans
WBGene00011486 T05E12.3 T05E12.3 Caenorhabditis elegans
WBGene00012101 zip-10 T27F2.4 Caenorhabditis elegans
WBGene00018138 folt-2 F37B4.7 Caenorhabditis elegans
WBGene00019957 R08E3.1 R08E3.1 Caenorhabditis elegans
WBGene00015608 math-3 C08F1.4 Caenorhabditis elegans
WBGene00016004 C18H9.6 C18H9.6 Caenorhabditis elegans
WBGene00016027 C23H5.8 C23H5.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule