WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  After array normalization, significance analysis of microarray was performed on data from individual time points (two class unpaired response) to identify genes with small but consistent changes. A false-discovery rate (FDR) of ~1% was used as criteria to consider a gene differentially regulated.Authors chose this particular FDR because it was the lowest FDR that did not significantly reduce the number of estimated true positives. Description  Genes that showed increased expression in adult animals after 2 hour exposure to B. pseudomallei R15 vs. exposure to OP50.
Primary Identifier  WBPaper00044091:Bpseudomallei_induced_2h Regulated By Treatment  Bacteria infection: Burkholderia pseudomallei BpR15

0 Anatomy Terms

157 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000480 cgp-1 Y38C9A.2 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000795 crn-2 CD4.2 Caenorhabditis elegans
WBGene00001029 dnj-11 F38A5.13 Caenorhabditis elegans
WBGene00001345 fos-1 F29G9.4 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001389 far-5 F15B9.3 Caenorhabditis elegans
WBGene00001532 gcy-5 ZK970.6 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00001983 elac-2 E04A4.4 Caenorhabditis elegans
WBGene00002069 ikb-1 C04F12.3 Caenorhabditis elegans
WBGene00002188 kgb-2 ZC416.4 Caenorhabditis elegans
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
WBGene00002980 lgg-1 C32D5.9 Caenorhabditis elegans
WBGene00003092 lys-3 Y22F5A.6 Caenorhabditis elegans
WBGene00003148 mbf-1 H21P03.1 Caenorhabditis elegans
WBGene00003602 nhr-3 H01A20.1 Caenorhabditis elegans
WBGene00003648 nhr-58 R11G11.2 Caenorhabditis elegans
WBGene00003767 nlp-29 B0213.4 Caenorhabditis elegans
WBGene00003768 nlp-30 B0213.5 Caenorhabditis elegans
WBGene00003769 nlp-31 B0213.6 Caenorhabditis elegans
WBGene00003844 odc-1 K11C4.4 Caenorhabditis elegans
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
WBGene00004001 pgp-7 T21E8.2 Caenorhabditis elegans
WBGene00004006 pgp-12 F22E10.1 Caenorhabditis elegans
WBGene00004131 tent-5 F55A12.9 Caenorhabditis elegans
WBGene00004405 rop-1 C12D8.11 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule