WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Seqsolve uses Cufflinks/Cuffdiff to quantify and identify transcripts with a significant level of expression between different conditions. p-value < 0,005. Description  Genes that showed significantly decreased expression in nlg-1(ok259) mutants comparing to in N2.
Primary Identifier  WBPaper00053023:nlg-1(ok259)_downregulated
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0 Anatomy Terms

23 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000597 col-8 F11H8.3 Caenorhabditis elegans
WBGene00000638 col-62 C15A11.6 Caenorhabditis elegans
WBGene00001581 gfi-1 F57F4.3 Caenorhabditis elegans
WBGene00002980 lgg-1 C32D5.9 Caenorhabditis elegans
WBGene00003431 msp-33 R05F9.8 Caenorhabditis elegans
WBGene00003764 nlp-26 Y43F8C.2 Caenorhabditis elegans
WBGene00006574 tin-13 DY3.1 Caenorhabditis elegans
WBGene00007458 ule-4 C08F11.11 Caenorhabditis elegans
WBGene00009895 scl-2 F49E11.10 Caenorhabditis elegans
WBGene00010440 ttr-51 JC8.8 Caenorhabditis elegans
WBGene00010790 adh-1 K12G11.3 Caenorhabditis elegans
WBGene00010957 nduo-6 MTCE.3 Caenorhabditis elegans
WBGene00010963 nduo-4 MTCE.25 Caenorhabditis elegans
WBGene00012383 ttr-17 Y5F2A.2 Caenorhabditis elegans
WBGene00016447 msd-4 C35D10.11 Caenorhabditis elegans
WBGene00023067 rpl-41.1 F54D7.6 Caenorhabditis elegans
WBGene00077526 C25A1.16 C25A1.16 Caenorhabditis elegans
WBGene00014307 F07H5.3 F07H5.3 Caenorhabditis elegans
WBGene00021872 clec-85 Y54G2A.6 Caenorhabditis elegans
WBGene00010086 F55B11.4 F55B11.4 Caenorhabditis elegans
WBGene00006650 tts-1 F09E10.11 Caenorhabditis elegans
WBGene00194674 F23D12.11 F23D12.11 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans

0 Regulated By Molecule