WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 119_0 expressed in mesoderm.
Primary Identifier  WBPaper00065841:119_0

4 Anatomy Terms

Definition Name Synonym Primary Identifier
Set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons GLRL lineage name: MSapaaaad WBbt:0004784
set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons, might be glial cells GLR anomalous_pharynx_cells (TreeNode) WBbt:0005176
Set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons GLRVL lineage name: MSapaaaav WBbt:0004782
Set of six cells that form a thin cylindrical sheet between pharynx and ring neuropile; no chemical synapses, but gap junctions with muscle arms and RME motor neurons GLRDL lineage name: MSaaaaaal WBbt:0004786

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000044 acr-5 K03F8.2 Caenorhabditis elegans
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000071 acy-4 T01C2.1 Caenorhabditis elegans
WBGene00000072 add-1 F39C12.2 Caenorhabditis elegans
WBGene00000434 ceh-9 Y65B4BR.9 Caenorhabditis elegans
WBGene00000438 ceh-14 F46C8.5 Caenorhabditis elegans
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans
WBGene00000726 col-153 F17C11.3 Caenorhabditis elegans
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
WBGene00000950 deg-1 C47C12.6 Caenorhabditis elegans
WBGene00000951 deg-3 K03B8.9 Caenorhabditis elegans
WBGene00000952 del-1 E02H4.1 Caenorhabditis elegans
WBGene00000955 des-2 T26H10.1 Caenorhabditis elegans
WBGene00001052 dop-1 F15A8.5 Caenorhabditis elegans
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001165 efn-4 F56A11.3 Caenorhabditis elegans
WBGene00001175 egl-6 C46F4.1 Caenorhabditis elegans
WBGene00001190 egl-23 Y37A1B.11 Caenorhabditis elegans
WBGene00001202 egl-36 R07A4.1 Caenorhabditis elegans
WBGene00001374 exp-2 F12F3.1 Caenorhabditis elegans
WBGene00001403 fbl-1 F56H11.1 Caenorhabditis elegans
WBGene00001450 flp-7 F49E10.3 Caenorhabditis elegans
WBGene00001452 flp-9 C36H8.3 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001505 fut-1 K08F8.3 Caenorhabditis elegans
WBGene00001518 gar-2 F47D12.1 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule