WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2 1.14.1, fold change > 1.5, p-value < 0.01. Description  Transcripts that showed significantly increased expression in ptrn-1(tm5597) comparing to in N2
Primary Identifier  WBPaper00056039:ptrn-1(tm5597)_upregulated
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0 Anatomy Terms

130 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000731 col-158 D2023.7 Caenorhabditis elegans
WBGene00000870 cyd-1 Y38F1A.5 Caenorhabditis elegans
WBGene00001059 dpf-6 F44B9.1 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001119 dyf-3 C04C3.5 Caenorhabditis elegans
WBGene00001390 far-6 W02A2.2 Caenorhabditis elegans
WBGene00001481 fog-1 Y54E10A.4 Caenorhabditis elegans
WBGene00001828 hch-1 F40E10.1 Caenorhabditis elegans
WBGene00001876 his-2 T10C6.13 Caenorhabditis elegans
WBGene00001880 his-6 F45F2.13 Caenorhabditis elegans
WBGene00001891 his-17 K06C4.5 Caenorhabditis elegans
WBGene00001905 his-31 F17E9.12 Caenorhabditis elegans
WBGene00001906 his-32 F17E9.10 Caenorhabditis elegans
WBGene00001935 his-61 F55G1.10 Caenorhabditis elegans
WBGene00001976 hmg-11 T05A7.4 Caenorhabditis elegans
WBGene00003040 lin-59 T12F5.4 Caenorhabditis elegans
WBGene00003055 lon-1 F48E8.1 Caenorhabditis elegans
WBGene00003246 mig-14 R06B9.6 Caenorhabditis elegans
WBGene00003766 nlp-28 B0213.3 Caenorhabditis elegans
WBGene00004728 sax-2 F21H11.2 Caenorhabditis elegans
WBGene00004927 snx-1 C05D9.1 Caenorhabditis elegans
WBGene00004945 sop-2 C50E10.4 Caenorhabditis elegans
WBGene00007007 mak-2 C44C8.6 Caenorhabditis elegans
WBGene00007752 wdfy-3 C26H9A.2 Caenorhabditis elegans
WBGene00007836 phdh-1 C31C9.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004121 ptrn-1 F35B3.5 Caenorhabditis elegans

0 Regulated By Molecule