WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq R package (1.18.0), P < 0.05 and fold change > 2 Description  Transcripts that showed significantly decreased expression in vit-5(RNAi) comparing to in N2 animals injected with empty vector.
Primary Identifier  WBPaper00064939:vit-5(RNAi)_downregulated
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0 Anatomy Terms

18 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000613 col-36 C27H5.5 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000731 col-158 D2023.7 Caenorhabditis elegans
WBGene00003017 lin-31 K10G6.1 Caenorhabditis elegans
WBGene00006927 vit-3 F59D8.1 Caenorhabditis elegans
WBGene00006928 vit-4 F59D8.2 Caenorhabditis elegans
WBGene00006929 vit-5 C04F6.1 Caenorhabditis elegans
WBGene00015111 B0281.4 B0281.4 Caenorhabditis elegans
WBGene00021741 Y50D4B.2 Y50D4B.2 Caenorhabditis elegans
WBGene00044537 B0238.15 B0238.15 Caenorhabditis elegans
WBGene00022559 fbxb-20 ZC204.9 Caenorhabditis elegans
WBGene00019044 F58E1.13 F58E1.13 Caenorhabditis elegans
WBGene00021293 Y25C1A.6 Y25C1A.6 Caenorhabditis elegans
WBGene00017181 F02E11.3 F02E11.3 Caenorhabditis elegans
WBGene00017453 F14D2.5 F14D2.5 Caenorhabditis elegans
WBGene00220161 Y46E12BL.11 Y46E12BL.11 Caenorhabditis elegans
WBGene00219849 C36C9.10 C36C9.10 Caenorhabditis elegans
WBGene00219959 F52D2.14 F52D2.14 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006929 vit-5 C04F6.1 Caenorhabditis elegans

0 Regulated By Molecule