WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 88 expressed in: RIH_RIR.
Primary Identifier  WBPaper00065623:88

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of one pharyngeal motorneuron. M4 neuron lineage name: MSpaaaaaa WBbt:0004467
Neuron class of one ring interneuron. RIH lineage name: ABprpappaaa WBbt:0003928
Neuron class of one ring interneuron. RIR lineage name: ABprpapppaa WBbt:0005047
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003743 nlp-5 F35C11.1 Caenorhabditis elegans
WBGene00008589 nlp-57 F08G12.8 Caenorhabditis elegans
WBGene00011392 sbt-1 T03D8.3 Caenorhabditis elegans
WBGene00018363 nlp-52 F42G9.4 Caenorhabditis elegans
WBGene00021043 pck-1 W05G11.6 Caenorhabditis elegans
WBGene00022144 pghm-1 Y71G12B.4 Caenorhabditis elegans
WBGene00022254 nlp-71 Y73B6BL.35 Caenorhabditis elegans
WBGene00045336 R11D1.12 R11D1.12 Caenorhabditis elegans
WBGene00019975 flp-34 R09A1.5 Caenorhabditis elegans
WBGene00010262 droe-4 F58E10.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule