WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 61 expressed in: g1P (pharyngeal gland).
Primary Identifier  WBPaper00065623:61

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Pharyngeal gland cell 1P, before fusion into g1ARP. g1P lineage name: MSaaaaapap WBbt:0004528
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008028 scl-6 C39E9.4 Caenorhabditis elegans
WBGene00011869 dod-6 T20G5.7 Caenorhabditis elegans
WBGene00018303 F41G3.10 F41G3.10 Caenorhabditis elegans
WBGene00044316 F41G3.21 F41G3.21 Caenorhabditis elegans
WBGene00269421 R06F6.14 R06F6.14 Caenorhabditis elegans
WBGene00008841 phat-8 F15A4.6 Caenorhabditis elegans
WBGene00011870 T20G5.8 T20G5.8 Caenorhabditis elegans
WBGene00016781 phat-7 C49G7.3 Caenorhabditis elegans
WBGene00018025 F35A5.2 F35A5.2 Caenorhabditis elegans
WBGene00010940 M163.8 M163.8 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule