WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 54 expressed in: Spermatheca-Uterine junction.
Primary Identifier  WBPaper00065623:54

6 Anatomy Terms

Definition Name Synonym Primary Identifier
A valve tissue that connects the spermatheca and the uterus of a hermaphrodite gonad. spermathecal-uterine junction sp-ut valve WBbt:0006756
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002023 hsp-25 C09B8.6 Caenorhabditis elegans
WBGene00002264 lec-1 W09H1.6 Caenorhabditis elegans
WBGene00002266 lec-3 ZK892.1 Caenorhabditis elegans
WBGene00003588 nex-1 ZC155.1 Caenorhabditis elegans
WBGene00007398 C07A4.3 C07A4.3 Caenorhabditis elegans
WBGene00009130 F25H5.8 F25H5.8 Caenorhabditis elegans
WBGene00011460 ttr-14 T05A10.3 Caenorhabditis elegans
WBGene00012285 pitr-6 W05H5.3 Caenorhabditis elegans
WBGene00012901 cnp-2 Y46G5A.10 Caenorhabditis elegans
WBGene00045456 C10A4.9 C10A4.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule