| Algorithm | DESeq was used. Fold change between the average of the four control replicates and the average of the four test replicates was used to calculate the significance using a negative binomial distribution. An adjusted P-value was calculated using the Benjamini-Hochberg method for multiple testing correction. | Description | mRNAs that showed increased expression in P-granule RNAi animales (simultaneously targeting pgl-1, pgl-3, glh-1 and glh-4) comparing to in control RNAi animals. Set 1 transcripts were defined as P-value < 0.05 and fold change > 2. |
| Primary Identifier | WBPaper00046805:P-granule-RNAi_upregulated_Set1 |
| Remark | Definition | Other Name | Public Name | Primary Identifier |
|---|---|---|---|---|
| At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. | 1-day post-L4 adult hermaphrodite Ce | WBls:0000064 |
| WormBase Gene ID | Gene Name | Sequence Name | Organism |
|---|---|---|---|
| WBGene00001598 | glh-1 | T21G5.3 | Caenorhabditis elegans |
| WBGene00001601 | glh-4 | T12F5.3 | Caenorhabditis elegans |
| WBGene00003992 | pgl-1 | ZK381.4 | Caenorhabditis elegans |
| WBGene00003994 | pgl-3 | C18G1.4 | Caenorhabditis elegans |
