WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  To identify DEGs, Students t test and the log2 median ratio test were performed to compute t values and median ratios for all the annotated genes. The adjusted P values from each test were computed using an empirical distribution of the null hypothesis, which was obtained from random permutations of the samples. Finally, the adjusted P values from the individual tests were combined to compute the overall P values using Stouffers method , and genes with overall P < 0.05 and fold change > 1.5 were selected as DEGs. Description  Genes that showed significantly increased expression in daf-2(e1370) comparing to in N2.
Primary Identifier  WBPaper00047131:daf-2(e1370)_upregulated_N2-background

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000006 aat-5 C55C2.5 Caenorhabditis elegans
WBGene00000013 abf-2 C50F2.10 Caenorhabditis elegans
WBGene00000033 abu-10 F35A5.3 Caenorhabditis elegans
WBGene00000036 ace-2 Y44E3A.2 Caenorhabditis elegans
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000103 akt-2 F28H6.1 Caenorhabditis elegans
WBGene00000108 alh-2 K04F1.15 Caenorhabditis elegans
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000135 amt-3 M195.3 Caenorhabditis elegans
WBGene00000169 aqp-1 F32A5.5 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000224 atgp-1 F26D10.9 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000246 bcc-1 M7.3 Caenorhabditis elegans
WBGene00000256 bli-6 Y73B6BL.34 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000282 cah-4 R01E6.3 Caenorhabditis elegans
WBGene00000285 cal-1 C13C12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans

0 Regulated By Molecule