WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially expressed transcripts were identified using the edgeR Bioconductor package (Empirical analysis of digital gene expression data in R, v 3.0.8). FDR cutoff was set to < 0.05, which yielded lists of genes with > 4-fold difference in expression. Description  Genes that showed significantly decreased expression 64 hours after infection by Nematocida parisii in fer-15(b26); fem-1(hc17), according to RNAseq.
Primary Identifier  WBPaper00045401:N.parisii_64h_downregulated Regulated By Treatment  Microsporidia: Nematocida parisii

0 Anatomy Terms

345 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000169 aqp-1 F32A5.5 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000216 asp-3 H22K11.1 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000283 cah-5 R173.1 Caenorhabditis elegans
WBGene00000597 col-8 F11H8.3 Caenorhabditis elegans
WBGene00000608 col-19 ZK1193.1 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000656 col-80 C09G5.5 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans
WBGene00000669 col-94 W05B2.1 Caenorhabditis elegans
WBGene00000670 col-95 Y41C4A.16 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000693 col-119 C53B4.5 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000698 col-124 C24F3.6 Caenorhabditis elegans
WBGene00000712 col-139 F41F3.4 Caenorhabditis elegans
WBGene00000713 col-140 F26F12.1 Caenorhabditis elegans
WBGene00000715 col-142 T15B7.4 Caenorhabditis elegans
WBGene00000716 col-143 T15B7.3 Caenorhabditis elegans
WBGene00000733 col-160 F57B1.4 Caenorhabditis elegans
WBGene00000751 col-178 C34F6.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

0 Regulated By Gene

0 Regulated By Molecule