WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Analysis of gene expression data was carried out with the Affymetrix Transcriptome Analysis Console. Data preprocessing (using RMA normalization) and QC metrics were performed using Affymetrix Expression Console TM and manually inspected afterwards. Expression analysis was carried out for each two pairwise conditions. FDR statistical correction for multiple testing resulted in a slightly lower number of DEGs in most cases. P-value < 0.05 and fold change > 2.0 were used to determine differentially expressed genes. Description  Genes with significantly increased expression in eat-2(ad465) treated with 2% DMSO for 72 hours, comparing to in N2 treated with 2% DMSO for 72 hours.
Primary Identifier  WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000013 abf-2 C50F2.10 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000074 adm-2 C04A11.4 Caenorhabditis elegans
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
WBGene00000108 alh-2 K04F1.15 Caenorhabditis elegans
WBGene00000123 ama-1 F36A4.7 Caenorhabditis elegans
WBGene00000149 apl-1 C42D8.8 Caenorhabditis elegans
WBGene00000150 apm-1 F55A12.7 Caenorhabditis elegans
WBGene00000161 apa-2 T20B5.1 Caenorhabditis elegans
WBGene00000185 arg-1 F31A9.3 Caenorhabditis elegans
WBGene00000197 aars-2 F28H1.3 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000216 asp-3 H22K11.1 Caenorhabditis elegans
WBGene00000218 asp-5 F21F8.3 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000294 cas-1 F41G4.2 Caenorhabditis elegans
WBGene00000296 cat-2 B0432.5 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000527 cle-1 C36B1.1 Caenorhabditis elegans
WBGene00000534 cpi-2 R01B10.1 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000545 clp-4 Y39A3CL.5 Caenorhabditis elegans
WBGene00000549 cls-2 R107.6 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000565 cnt-1 Y17G7B.15 Caenorhabditis elegans
WBGene00000690 col-116 F17E9.1 Caenorhabditis elegans
WBGene00000766 coq-6 K07B1.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans

0 Regulated By Molecule