WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cufflinks FPKM value >=1. Description  Transcripts unqiuely expressed in intestine, according to PAT-Seq analysis using Pges-1-GFP-3XFLAG mRNA tagging.
Primary Identifier  WBPaper00050990:intestine_enriched

1 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000050 acr-11 D2092.3 Caenorhabditis elegans
WBGene00000070 acy-3 C44F1.5 Caenorhabditis elegans
WBGene00000073 add-2 F57F5.4 Caenorhabditis elegans
WBGene00000075 adm-4 ZK154.7 Caenorhabditis elegans
WBGene00000084 aex-1 D2030.10 Caenorhabditis elegans
WBGene00000086 aex-3 C02H7.3 Caenorhabditis elegans
WBGene00000093 agt-1 Y62E10A.5 Caenorhabditis elegans
WBGene00000137 amx-1 R13G10.2 Caenorhabditis elegans
WBGene00000138 amx-2 B0019.1 Caenorhabditis elegans
WBGene00000139 amx-3 F25C8.2 Caenorhabditis elegans
WBGene00000144 apc-10 F15H10.3 Caenorhabditis elegans
WBGene00000148 aph-2 ZC434.6 Caenorhabditis elegans
WBGene00000179 aqp-11 ZK525.2 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000212 asm-2 ZK455.4 Caenorhabditis elegans
WBGene00000259 bpl-1 F13H8.10 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
WBGene00000375 cyp-44A1 ZK177.5 Caenorhabditis elegans
WBGene00000386 cdc-25.1 K06A5.7 Caenorhabditis elegans
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000532 clh-5 C07H4.2 Caenorhabditis elegans
WBGene00000533 clh-6 R07B7.1 Caenorhabditis elegans
WBGene00000539 cln-3.1 F07B10.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

0 Regulated By Gene

0 Regulated By Molecule