WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Data sets were normalized by RMA and transcripts showing relative PVD enrichment (>=1.5X) vs. the reference sample were identified by SAM analysis (False Discovery Rate, FDR < 1%) Description  Genes with expression 1.5X depleted in PVD and OLL neurons.
Primary Identifier  WBPaper00036375:depleted_in_PVD_OLL
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two neurons with ciliated endings in the lateral outer labial sensilla. OLL   WBbt:0006847
Neuron class of two interneurons with cell bodies situated laterally in the posterior body. PVD   WBbt:0006831

963 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000027 abu-4 Y5H2A.3 Caenorhabditis elegans
WBGene00000134 amt-2 F49E11.3 Caenorhabditis elegans
WBGene00000206 asb-1 F35G12.10 Caenorhabditis elegans
WBGene00000209 asg-1 K07A12.3 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000255 bli-5 F45G2.5 Caenorhabditis elegans
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
WBGene00000392 cdd-2 F49E8.4 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000555 cnc-1 R09B5.2 Caenorhabditis elegans
WBGene00000558 cnc-4 R09B5.9 Caenorhabditis elegans
WBGene00000593 col-2 W01B6.7 Caenorhabditis elegans
WBGene00000596 col-7 C15A11.5 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000602 col-13 F15H10.2 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000608 col-19 ZK1193.1 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000610 col-33 F36A4.6 Caenorhabditis elegans
WBGene00000611 col-34 F36A4.10 Caenorhabditis elegans
WBGene00000612 col-35 C15A11.1 Caenorhabditis elegans
WBGene00000614 col-37 ZK863.2 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000621 col-44 F54B11.2 Caenorhabditis elegans
WBGene00000622 col-45 F53G12.7 Caenorhabditis elegans
WBGene00000627 col-50 T28F2.6 Caenorhabditis elegans
WBGene00000628 col-51 T28F2.8 Caenorhabditis elegans
WBGene00000632 col-55 T05E7.2 Caenorhabditis elegans
WBGene00000634 col-58 F26B1.4 Caenorhabditis elegans
WBGene00000636 col-60 F22D6.10 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035

1 Processes

Primary Identifier
WBbiopr:00000024

0 Regulated By Gene

0 Regulated By Molecule