WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50 for 12 or 24 hours.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_2

0 Anatomy Terms

851 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000019 abt-1 C24F3.5 Caenorhabditis elegans
WBGene00000023 abt-5 Y53C10A.9 Caenorhabditis elegans
WBGene00000389 cdc-25.4 R05H5.2 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000399 cdh-7 R05H10.6 Caenorhabditis elegans
WBGene00000606 col-17 F11G11.10 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000623 col-46 Y18H1A.13 Caenorhabditis elegans
WBGene00000702 col-128 F12F6.9 Caenorhabditis elegans
WBGene00000746 col-173 F41C6.5 Caenorhabditis elegans
WBGene00000771 cpb-2 C30B5.3 Caenorhabditis elegans
WBGene00000878 cyn-2 ZK520.5 Caenorhabditis elegans
WBGene00000930 dao-4 ZC373.6 Caenorhabditis elegans
WBGene00001070 dpy-8 C31H2.2 Caenorhabditis elegans
WBGene00001079 dpy-20 T22B3.1 Caenorhabditis elegans
WBGene00001246 elo-8 Y47D3A.30 Caenorhabditis elegans
WBGene00001424 fis-1 F41G3.4 Caenorhabditis elegans
WBGene00001487 frk-1 T04B2.2 Caenorhabditis elegans
WBGene00001603 gln-2 K03H1.1 Caenorhabditis elegans
WBGene00001839 hdl-1 ZK829.2 Caenorhabditis elegans
WBGene00001885 his-11 ZK131.5 Caenorhabditis elegans
WBGene00001944 his-70 E03A3.4 Caenorhabditis elegans
WBGene00002120 ins-37 F08G2.6 Caenorhabditis elegans
WBGene00002193 kin-5 T13H10.1 Caenorhabditis elegans
WBGene00002204 kin-21 W08D2.8 Caenorhabditis elegans
WBGene00002206 kin-24 K07F5.4 Caenorhabditis elegans
WBGene00002208 kin-26 T06C10.6 Caenorhabditis elegans
WBGene00003090 lys-1 Y22F5A.4 Caenorhabditis elegans
WBGene00003424 msp-3 F26G1.7 Caenorhabditis elegans
WBGene00003425 msp-10 K07F5.2 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule