WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Estimation of transcript abundance and significantly differentially expressed genes were identified by Cuffdiff using the quartile normalization method. Transcripts with a significant change between different conditions (adjusted p-value < 0.01 by the false discovery rate, FDR) were treated as signature for each comparison. Description  Genes that showed significantly altered expression between N2 and npr-1(ur89) strains exposed to either the nematocidal B. thuringiensis B-18247, the pathogenic P. aeruginosa PA14, or the control E. coli OP50 for 12 or 24 hours.
Primary Identifier  WBPaper00049498:npr-1(ur89)_regulated_6

0 Anatomy Terms

1000 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000005 aat-4 T13A10.10 Caenorhabditis elegans
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000075 adm-4 ZK154.7 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000165 aps-3 Y48G8AL.14 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000198 art-1 C15F1.6 Caenorhabditis elegans
WBGene00000202 exos-4.2 Y6D11A.1 Caenorhabditis elegans
WBGene00000209 asg-1 K07A12.3 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000264 brc-1 C36A4.8 Caenorhabditis elegans
WBGene00000274 btf-1 F15D4.1 Caenorhabditis elegans
WBGene00000275 bub-1 R06C7.8 Caenorhabditis elegans
WBGene00000283 cah-5 R173.1 Caenorhabditis elegans
WBGene00000378 cct-2 T21B10.7 Caenorhabditis elegans
WBGene00000416 ced-2 Y41D4B.13 Caenorhabditis elegans
WBGene00000417 ced-3 C48D1.2 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000502 chp-1 Y110A7A.13 Caenorhabditis elegans
WBGene00000532 clh-5 C07H4.2 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000597 col-8 F11H8.3 Caenorhabditis elegans
WBGene00000608 col-19 ZK1193.1 Caenorhabditis elegans
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000656 col-80 C09G5.5 Caenorhabditis elegans
WBGene00000657 col-81 F38A3.1 Caenorhabditis elegans
WBGene00000668 col-93 W05B2.5 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003807 npr-1 C39E6.6 Caenorhabditis elegans

0 Regulated By Molecule