WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in XXXL, XXXR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:XXX
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
Embryonic head hypodermal cell XXXL lineage name: ABplaaapaa WBbt:0004581
Embryonic head hypodermal cell XXXR lineage name: ABarpappaa WBbt:0004579

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000182 arf-1 B0336.2 Caenorhabditis elegans
WBGene00000233 avr-15 R11G10.1 Caenorhabditis elegans
WBGene00000433 ceh-8 ZK265.4 Caenorhabditis elegans
WBGene00000460 ceh-39 T26C11.7 Caenorhabditis elegans
WBGene00000630 col-53 M01A12.1 Caenorhabditis elegans
WBGene00000639 col-63 ZK265.2 Caenorhabditis elegans
WBGene00000644 col-68 C50D2.4 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000750 col-177 F59F3.2 Caenorhabditis elegans
WBGene00000905 daf-9 T13C5.1 Caenorhabditis elegans
WBGene00000978 dhs-15 R05D8.10 Caenorhabditis elegans
WBGene00001032 dnj-14 K02G10.8 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001436 fkh-4 C29F7.5 Caenorhabditis elegans
WBGene00001440 fkh-8 F40H3.4 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001479 fmo-4 F53F4.5 Caenorhabditis elegans
WBGene00001606 gln-5 F26D10.10 Caenorhabditis elegans
WBGene00001750 gst-2 K08F4.6 Caenorhabditis elegans
WBGene00001753 gst-5 R03D7.6 Caenorhabditis elegans
WBGene00001783 gst-35 Y1H11.2 Caenorhabditis elegans
WBGene00001858 hil-7 C01B10.5 Caenorhabditis elegans
WBGene00001859 hil-8 T05E8.2 Caenorhabditis elegans
WBGene00001940 his-66 H02I12.6 Caenorhabditis elegans
WBGene00002034 htp-3 F57C9.5 Caenorhabditis elegans
WBGene00002245 lag-1 K08B4.1 Caenorhabditis elegans
WBGene00002253 lbp-1 F40F4.3 Caenorhabditis elegans
WBGene00002299 let-23 ZK1067.1 Caenorhabditis elegans
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
WBGene00003003 lin-14 T25C12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule