WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Comparisons were made between genotypes by subtracting the mean log value of one ratio from another, and the significance of the difference was evaluated using Student t-test for two populations. For the fem-3(gf) versus fem-1(lf) direct comparison, authors performed the same analysis, except they used a Students t-test for one population. Author chose a combination of a twofold difference with a t value exceeding 99% confidence (P < 0.01), because these criteria allowed the inclusion of essentially all genes that had previously been identified as germline-enriched in a wt/glp-4 hermaphrodite comparison. Additionally, requiring a twofold difference reduced false positives, as the number of genes with two-fold difference and a P<0.01 only included ~100 genes more than with P < 0.001, and almost all genes showed germline expression by in situ hybridization. Description  mixed spermatogenesis/somatic
Primary Identifier  [cgc6390]:mixed_spermatogenesis-somatic

0 Anatomy Terms

521 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
WBGene00000090 age-1 B0334.8 Caenorhabditis elegans
WBGene00000150 apm-1 F55A12.7 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000248 ben-1 C54C6.2 Caenorhabditis elegans
WBGene00000264 brc-1 C36A4.8 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000666 col-91 F09G8.6 Caenorhabditis elegans
WBGene00000724 col-151 AC3.6 Caenorhabditis elegans
WBGene00000776 cpl-1 T03E6.7 Caenorhabditis elegans
WBGene00000788 cpz-1 F32B5.8 Caenorhabditis elegans
WBGene00000821 csp-3 Y47H9C.6 Caenorhabditis elegans
WBGene00000968 dhs-4 T05F1.10 Caenorhabditis elegans
WBGene00000971 dhs-7 E04F6.7 Caenorhabditis elegans
WBGene00001242 elo-4 C40H1.4 Caenorhabditis elegans
WBGene00001246 elo-8 Y47D3A.30 Caenorhabditis elegans
WBGene00001249 elt-1 W09C2.1 Caenorhabditis elegans
WBGene00001371 exl-1 F26H11.5 Caenorhabditis elegans
WBGene00001390 far-6 W02A2.2 Caenorhabditis elegans
WBGene00001432 fkb-7 B0511.1 Caenorhabditis elegans
WBGene00001476 fmo-1 K08C7.2 Caenorhabditis elegans
WBGene00001538 gcy-12 F08B1.2 Caenorhabditis elegans
WBGene00002052 ifa-4 K05B2.3 Caenorhabditis elegans
WBGene00002087 ins-4 ZK75.1 Caenorhabditis elegans
WBGene00002090 ins-7 ZK1251.2 Caenorhabditis elegans
WBGene00002198 kin-14 F22D6.1 Caenorhabditis elegans
WBGene00002254 lbp-2 F40F4.2 Caenorhabditis elegans
WBGene00002255 lbp-3 F40F4.4 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

0 Regulated By Molecule