WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in RMDL, RMDR, RMDDL, RMDDR, RMDVL, RMDVR according to single cell RNAseq.
Primary Identifier  WBPaper00061340:RMD
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
Ring motor neuron/interneuron, many synapses RMDL lineage name: ABalpppapad WBbt:0005037
Ring motor neuron/interneuron, many synapses RMDR lineage name: ABpraaaapad WBbt:0005033
Ring motor neuron/interneuron, many synapses RMDVL lineage name: ABalppapaaa WBbt:0005031
Ring motor neuron/interneuron, many synapses RMDVR lineage name: ABarapppaaa WBbt:0005029
Ring motor neuron/interneuron, many synapses RMDDL lineage name: ABalpapapaa WBbt:0005039
Ring motor neuron/interneuron, many synapses RMDDR lineage name: ABarappapaa WBbt:0005038

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000042 acr-2 K11G12.2 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000057 acr-18 F28F8.1 Caenorhabditis elegans
WBGene00000146 ape-1 F46F3.4 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000282 cah-4 R01E6.3 Caenorhabditis elegans
WBGene00000284 cah-6 T28F2.3 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000431 ceh-6 K02B12.1 Caenorhabditis elegans
WBGene00000434 ceh-9 Y65B4BR.9 Caenorhabditis elegans
WBGene00000453 ceh-32 W05E10.3 Caenorhabditis elegans
WBGene00000478 cfz-2 F27E11.3 Caenorhabditis elegans
WBGene00000491 che-12 B0024.8 Caenorhabditis elegans
WBGene00000501 cho-1 C48D1.3 Caenorhabditis elegans
WBGene00000748 col-175 C35B8.1 Caenorhabditis elegans
WBGene00000980 dhs-17 F29G9.6 Caenorhabditis elegans
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
WBGene00001163 efn-2 C43F9.8 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001202 egl-36 R07A4.1 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001411 fem-1 F35D6.1 Caenorhabditis elegans
WBGene00001442 fkh-10 C25A1.2 Caenorhabditis elegans
WBGene00001449 flp-6 F07D3.2 Caenorhabditis elegans
WBGene00001452 flp-9 C36H8.3 Caenorhabditis elegans
WBGene00001461 flp-18 Y48D7A.2 Caenorhabditis elegans
WBGene00001475 fmi-1 F15B9.7 Caenorhabditis elegans
WBGene00001490 frm-3 H05G16.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule