WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in PVT according to single cell RNAseq.
Primary Identifier  WBPaper00061340:PVT
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one interneuron, projects along ventral cord to ring. PVT lineage name: ABplpappppa WBbt:0004070

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000166 apt-9 W04G3.4 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000281 cah-3 K05G3.3 Caenorhabditis elegans
WBGene00000403 casy-1 B0034.3 Caenorhabditis elegans
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans
WBGene00001189 egl-21 F01D4.4 Caenorhabditis elegans
WBGene00001211 egl-47 C50H2.2 Caenorhabditis elegans
WBGene00001246 elo-8 Y47D3A.30 Caenorhabditis elegans
WBGene00001448 flp-5 C03G5.7 Caenorhabditis elegans
WBGene00001484 fox-1 T07D1.4 Caenorhabditis elegans
WBGene00001502 ftt-2 F52D10.3 Caenorhabditis elegans
WBGene00001586 lgc-57 C09G5.1 Caenorhabditis elegans
WBGene00001664 gpa-2 F38E1.5 Caenorhabditis elegans
WBGene00001682 gpc-2 F08B6.2 Caenorhabditis elegans
WBGene00001911 his-37 C50F4.7 Caenorhabditis elegans
WBGene00001915 his-41 C50F4.5 Caenorhabditis elegans
WBGene00001958 hlh-14 C18A3.8 Caenorhabditis elegans
WBGene00001988 hot-3 W02B8.5 Caenorhabditis elegans
WBGene00002132 inx-10 T18H9.5 Caenorhabditis elegans
WBGene00002146 ipp-5 C09B8.1 Caenorhabditis elegans
WBGene00002178 jnk-1 B0478.1 Caenorhabditis elegans
WBGene00002988 lim-6 K03E6.1 Caenorhabditis elegans
WBGene00003017 lin-31 K10G6.1 Caenorhabditis elegans
WBGene00003047 lis-1 T03F6.5 Caenorhabditis elegans
WBGene00003102 mab-5 C08C3.3 Caenorhabditis elegans
WBGene00003165 mec-1 T07H8.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule