WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in hypodermis according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Hypodermis
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000560 cnc-6 Y46E12A.1 Caenorhabditis elegans
WBGene00000603 col-14 C46A5.3 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000631 col-54 F33D11.3 Caenorhabditis elegans
WBGene00000634 col-58 F26B1.4 Caenorhabditis elegans
WBGene00000650 col-74 ZK1248.2 Caenorhabditis elegans
WBGene00000652 col-76 M110.1 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000681 col-107 C34H4.4 Caenorhabditis elegans
WBGene00000689 col-115 Y42H9B.1 Caenorhabditis elegans
WBGene00000695 col-121 F56D5.1 Caenorhabditis elegans
WBGene00000699 col-125 C29F4.1 Caenorhabditis elegans
WBGene00000704 col-130 F08G5.4 Caenorhabditis elegans
WBGene00000730 col-157 T11F9.9 Caenorhabditis elegans
WBGene00000738 col-165 F14H12.1 Caenorhabditis elegans
WBGene00000853 cut-6 M142.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001108 dsl-6 H02I12.4 Caenorhabditis elegans
WBGene00001242 elo-4 C40H1.4 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001389 far-5 F15B9.3 Caenorhabditis elegans
WBGene00001690 grd-1 R08B4.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule