WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in Caaaaa, Caaaap, Caaapa, Caaapp, Caappd, Cpaaaa, Cpaaap, Cpaapa, Cpaapp, Cpapaa, Cpapap, Cpappd according to single cell RNAseq.
Primary Identifier  WBPaper00061340:hyp7_C_lineage
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12 Anatomy Terms

Definition Name Synonym Primary Identifier
Embryonic cell of lineage Cpaapa fuses into embryonic large hypodermal syncytium hyp7. Cpaapa   WBbt:0005886
Embryonic cell of lineage Caappd fuses into embryonic large hypodermal syncytium hyp7. Caappd   WBbt:0005991
Embryonic cell of lineage Caaaaa fuses into embryonic large hypodermal syncytium hyp7. Caaaaa   WBbt:0006076
Embryonic cell of lineage Cpappd fuses into embryonic large hypodermal syncytium hyp7. Cpappd   WBbt:0006100
Embryonic cell of lineage Cpaaaa fuses into embryonic large hypodermal syncytium hyp7. Cpaaaa   WBbt:0006151
Embryonic cell of lineage Cpapaa fuses into embryonic large hypodermal syncytium hyp7. Cpapaa   WBbt:0006231
Embryonic cell of lineage Cpapap fuses into embryonic large hypodermal syncytium hyp7. Cpapap   WBbt:0006374
Embryonic cell of lineage Cpaaap fuses into embryonic large hypodermal syncytium hyp7. Cpaaap   WBbt:0006357
Embryonic cell of lineage Caaaap fuses into embryonic large hypodermal syncytium hyp7. Caaaap   WBbt:0006319
Embryonic cell of lineage Cpaapp fuses into embryonic large hypodermal syncytium hyp7. Cpaapp   WBbt:0006399
Embryonic cell of lineage Caaapp fuses into embryonic large hypodermal syncytium hyp7. Caaapp   WBbt:0006521
Embryonic cell of lineage Caaapa fuses into embryonic large hypodermal syncytium hyp7. Caaapa   WBbt:0006502

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000040 aco-1 ZK455.1 Caenorhabditis elegans
WBGene00000115 alh-9 F01F1.6 Caenorhabditis elegans
WBGene00000116 alh-10 C54D1.4 Caenorhabditis elegans
WBGene00000240 pah-1 K08F8.4 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000517 cki-2 T05A6.2 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000652 col-76 M110.1 Caenorhabditis elegans
WBGene00000695 col-121 F56D5.1 Caenorhabditis elegans
WBGene00000749 col-176 ZC373.7 Caenorhabditis elegans
WBGene00000775 cpin-1 F38E11.3 Caenorhabditis elegans
WBGene00000882 cyn-6 F42G9.2 Caenorhabditis elegans
WBGene00000963 dhp-1 R06C7.3 Caenorhabditis elegans
WBGene00000968 dhs-4 T05F1.10 Caenorhabditis elegans
WBGene00000972 dhs-8 K10H10.3 Caenorhabditis elegans
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00000991 dhs-28 M03A8.1 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001065 dpy-3 EGAP7.1 Caenorhabditis elegans
WBGene00001069 dpy-7 F46C8.6 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001073 dpy-11 F46E10.9 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001105 dsl-3 Y41D4B.10 Caenorhabditis elegans
WBGene00001108 dsl-6 H02I12.4 Caenorhabditis elegans
WBGene00001251 elt-3 K02B9.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule