WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The Cuffdiff Differential Gene Expression tool (version 0.0.5) was used to calculate differential gene expression using a false discovery rate of 0.05, a minimum alignment count of 100 and with bias correction to obtain gene and transcript expression level data along with fold change (in log2 scale) and P values (raw and corrected for multiple testing). Description  Transcripts that showed significantly increased expression by DAF-16 by comparing glp-1(e2141ts) with daf-16(mu86);glp-1(e2141ts) animals.
Primary Identifier  WBPaper00049217:DAF-16_upregulated

0 Anatomy Terms

343 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000013 abf-2 C50F2.10 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000102 akt-1 C12D8.10 Caenorhabditis elegans
WBGene00000103 akt-2 F28H6.1 Caenorhabditis elegans
WBGene00000117 alh-11 F42G9.5 Caenorhabditis elegans
WBGene00000231 atx-2 D2045.1 Caenorhabditis elegans
WBGene00000273 brp-1 Y79H2A.1 Caenorhabditis elegans
WBGene00000383 cdc-14 C17G10.4 Caenorhabditis elegans
WBGene00000421 ced-7 C48B4.4 Caenorhabditis elegans
WBGene00000459 ceh-38 F22D3.1 Caenorhabditis elegans
WBGene00000482 chd-3 T14G8.1 Caenorhabditis elegans
WBGene00000515 ckc-1 T27A10.3 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000542 clp-1 C06G4.2 Caenorhabditis elegans
WBGene00000708 col-135 M199.5 Caenorhabditis elegans
WBGene00000876 cyl-1 C52E4.6 Caenorhabditis elegans
WBGene00000898 daf-2 Y55D5A.5 Caenorhabditis elegans
WBGene00000899 daf-3 F25E2.5 Caenorhabditis elegans
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
WBGene00000973 dhs-9 Y32H12A.3 Caenorhabditis elegans
WBGene00000975 dhs-12 K08F4.9 Caenorhabditis elegans
WBGene00001081 dpy-22 F47A4.2 Caenorhabditis elegans
WBGene00001101 dsh-1 C34F11.9 Caenorhabditis elegans
WBGene00001156 ech-7 Y105E8A.4 Caenorhabditis elegans
WBGene00001160 efk-1 F42A10.4 Caenorhabditis elegans
WBGene00001172 egl-3 C51E3.7 Caenorhabditis elegans
WBGene00001173 egl-4 F55A8.2 Caenorhabditis elegans
WBGene00001178 egl-9 F22E12.4 Caenorhabditis elegans
WBGene00001194 egl-27 C04A2.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans

0 Regulated By Molecule