WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially regulated transcripts were determined by edgeR. For the microarray and NanoString analyses, genes were considered differentially regulated at FDR < 0.05 and log2 (Fold Change) > 1 or < 1. Description  Transcripts that showed significantly increased expression in nipi-3(fr4) comparing to in N2.
Primary Identifier  WBPaper00050515:nipi-3(fr4)_upregulated
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0 Anatomy Terms

294 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000176 aqp-8 K02G10.7 Caenorhabditis elegans
WBGene00000190 warf-1 F45E4.1 Caenorhabditis elegans
WBGene00000373 cyp-14A5 F08F3.7 Caenorhabditis elegans
WBGene00000514 ckb-4 F22F7.5 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00000562 cng-1 F14H8.6 Caenorhabditis elegans
WBGene00000596 col-7 C15A11.5 Caenorhabditis elegans
WBGene00000615 col-38 F54C9.4 Caenorhabditis elegans
WBGene00000616 col-39 C09G5.4 Caenorhabditis elegans
WBGene00000625 col-48 Y54E10BL.2 Caenorhabditis elegans
WBGene00000653 col-77 M195.1 Caenorhabditis elegans
WBGene00000663 col-88 W05G11.3 Caenorhabditis elegans
WBGene00000666 col-91 F09G8.6 Caenorhabditis elegans
WBGene00000678 col-104 F58F6.1 Caenorhabditis elegans
WBGene00000683 col-109 Y38C1BA.3 Caenorhabditis elegans
WBGene00000694 col-120 Y11D7A.11 Caenorhabditis elegans
WBGene00000700 col-126 F54D1.2 Caenorhabditis elegans
WBGene00000704 col-130 F08G5.4 Caenorhabditis elegans
WBGene00000718 col-145 B0222.7 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000734 col-161 C50B6.4 Caenorhabditis elegans
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000841 cul-6 K08E7.7 Caenorhabditis elegans
WBGene00001067 dpy-5 F27C1.8 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00001757 gst-9 R05F9.5 Caenorhabditis elegans
WBGene00001770 gst-22 F21H7.1 Caenorhabditis elegans
WBGene00001786 gst-38 F35E8.8 Caenorhabditis elegans
WBGene00001787 gst-39 Y53F4B.33 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010700 nipi-3 K09A9.1 Caenorhabditis elegans

0 Regulated By Molecule