WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2. Description  Transcripts that showed significantly decreased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, comparing to in control animals at L4 larva.
Primary Identifier  WBPaper00050859:downregulated_P-granule(-)_vs_control_L4
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0 Anatomy Terms

9 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001598 glh-1 T21G5.3 Caenorhabditis elegans
WBGene00001599 glh-2 C55B7.1 Caenorhabditis elegans
WBGene00001601 glh-4 T12F5.3 Caenorhabditis elegans
WBGene00001855 hil-4 C18G1.5 Caenorhabditis elegans
WBGene00001862 him-3 ZK381.1 Caenorhabditis elegans
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans
WBGene00003994 pgl-3 C18G1.4 Caenorhabditis elegans
WBGene00019978 hacd-1 R09B5.6 Caenorhabditis elegans
WBGene00020467 T12F5.2 T12F5.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

4 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001598 glh-1 T21G5.3 Caenorhabditis elegans
WBGene00001601 glh-4 T12F5.3 Caenorhabditis elegans
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans
WBGene00003994 pgl-3 C18G1.4 Caenorhabditis elegans

0 Regulated By Molecule