WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  The threshold for the detected proteins and matched peptides was set at sequence coverage >= 20% and ProteinPilot unused score >= 1.31 (a confidence threshold of 95%). Theoretical pI and Mw of each identified protein were calculated by using the pI/Mw tool of the ExPASy proteomic server (Swiss Institute of Bioinformatics, Lausanne, Switzerland). Description  Proteins constantly downregulated in pgl-1(bn101) and pgl-1(ct131) at both 20 C and 25 C, according to 2D-DIGE and LC-MS/MS.
Primary Identifier  WBPaper00041097:pgl-1_upregulated

0 Anatomy Terms

9 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001685 gpd-3 K10B3.7 Caenorhabditis elegans
WBGene00002008 hsp-4 F43E2.8 Caenorhabditis elegans
WBGene00002268 lec-5 ZK1248.16 Caenorhabditis elegans
WBGene00004504 rpt-4 F23F1.8 Caenorhabditis elegans
WBGene00006926 vit-2 C42D8.2 Caenorhabditis elegans
WBGene00010130 vha-14 F55H2.2 Caenorhabditis elegans
WBGene00010790 adh-1 K12G11.3 Caenorhabditis elegans
WBGene00019001 ipgm-1 F57B10.3 Caenorhabditis elegans
WBGene00019492 K07E3.4 K07E3.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage after an hermaphrodite animal is fully-developed and reaches maturity. adult hermaphrodite Ce WBls:0000057

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans

0 Regulated By Molecule