WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 85 expressed in: vm1 (vulval muscle).
Primary Identifier  WBPaper00065623:85
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of two pharyngeal interneuron. I2 neuron   WBbt:0003645
Neuron class of one pharyngeal motorneuron. M4 neuron lineage name: MSpaaaaaa WBbt:0004467
second layer pharyngeal muscle cell. pm2 m2 WBbt:0003742
Set one type of vulval muscle. vm1 vulval muscle, type 1 WBbt:0006917
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001263 emb-9 K04H4.1 Caenorhabditis elegans
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
WBGene00002247 lam-1 W03F8.5 Caenorhabditis elegans
WBGene00002255 lbp-3 F40F4.4 Caenorhabditis elegans
WBGene00002280 let-2 F01G12.5 Caenorhabditis elegans
WBGene00003812 nrf-5 F55B12.5 Caenorhabditis elegans
WBGene00006787 unc-52 ZC101.2 Caenorhabditis elegans
WBGene00011832 bgal-1 T19B10.3 Caenorhabditis elegans
WBGene00016913 lam-2 C54D1.5 Caenorhabditis elegans
WBGene00015633 C09D4.2 C09D4.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule