WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. Description  MicroRNAs that showed significantly increased expression in Day 5 (5-days post-L4) vs. Day 0 (L4 larva) of adulthood mir-71(n4115) animals.
Primary Identifier  WBPaper00053318:Aging_upregulated_miRNA_mir-71(n4115)
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0 Anatomy Terms

23 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003262 mir-34 Y41G9A.7 Caenorhabditis elegans
WBGene00003263 mir-35 Y62F5A.2 Caenorhabditis elegans
WBGene00219261 mir-4926 C27A12.13 Caenorhabditis elegans
WBGene00003339 mir-245 F55D12.7 Caenorhabditis elegans
WBGene00003300 mir-72 F53G2.9 Caenorhabditis elegans
WBGene00003266 mir-38 Y62F5A.5 Caenorhabditis elegans
WBGene00014534 mir-355 T27D12.5 Caenorhabditis elegans
WBGene00235084 mir-5594 K12D12.10 Caenorhabditis elegans
WBGene00003270 mir-42 ZK930.8 Caenorhabditis elegans
WBGene00003305 mir-77 T21B4.13 Caenorhabditis elegans
WBGene00003331 mir-238 K01F9.5 Caenorhabditis elegans
WBGene00194822 mir-2208.1 Y55F3AM.16 Caenorhabditis elegans
WBGene00194823 mir-2208.2 Y55F3AM.17 Caenorhabditis elegans
WBGene00194824 mir-2209.1 Y55F3AM.18 Caenorhabditis elegans
WBGene00194826 mir-2209.3 Y55F3AM.20 Caenorhabditis elegans
WBGene00003337 mir-243 R08C7.14 Caenorhabditis elegans
WBGene00003340 mir-246 ZK593.10 Caenorhabditis elegans
WBGene00045354 mir-796 C14E2.8 Caenorhabditis elegans
WBGene00050924 mir-1018 Y59E1B.3 Caenorhabditis elegans
WBGene00003333 mir-239.2 C34E11.6 Caenorhabditis elegans
WBGene00003332 mir-239.1 C34E11.5 Caenorhabditis elegans
WBGene00077705 mir-1829.1 K09A9.7 Caenorhabditis elegans
WBGene00003291 mir-63 C16H3.5 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage. 4-days post-L4 adult hermaphrodite Ce WBls:0000067

0 Processes

0 Regulated By Gene

0 Regulated By Molecule