WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differential expression for both small RNA- and mRNA-seq data was tested using DESeq2; P-values were adjusted for multiple testing by Benjamini-Hochberg method. Description  MicroRNAs that showed significantly decreased expression in Day 5 (5-days post-L4) vs. Day 0 (L4 larva) of adulthood mir-71(n4115) animals.
Primary Identifier  WBPaper00053318:Aging_downregulated_miRNA_mir-71(n4115)

0 Anatomy Terms

17 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002285 let-7 C05G5.6 Caenorhabditis elegans
WBGene00003264 mir-36 Y62F5A.3 Caenorhabditis elegans
WBGene00003265 mir-37 Y62F5A.4 Caenorhabditis elegans
WBGene00003328 mir-235 T09B4.12 Caenorhabditis elegans
WBGene00077708 mir-1817 Y37F4.9 Caenorhabditis elegans
WBGene00077723 mir-1830 B0286.7 Caenorhabditis elegans
WBGene00003267 mir-39 Y62F5A.6 Caenorhabditis elegans
WBGene00003268 mir-40 Y62F5A.7 Caenorhabditis elegans
WBGene00003279 mir-51 F36H1.7 Caenorhabditis elegans
WBGene00023454 mir-357 F25G6.10 Caenorhabditis elegans
WBGene00023455 mir-358 F25G6.11 Caenorhabditis elegans
WBGene00045360 mir-800 R04A9.8 Caenorhabditis elegans
WBGene00003323 mir-230 F46G11.5 Caenorhabditis elegans
WBGene00003330 mir-237 F22F1.4 Caenorhabditis elegans
WBGene00045350 mir-788 T01B10.6 Caenorhabditis elegans
WBGene00003282 mir-54 F09A5.5 Caenorhabditis elegans
WBGene00077716 mir-1819 R11.5 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  At 20 Centigrade: 96-120 hours after L4-adult molt. 7-8 days after first cleavage. 4-days post-L4 adult hermaphrodite Ce WBls:0000067

0 Processes

0 Regulated By Gene

0 Regulated By Molecule