WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Statistical analysis was based on t-test for independent samples via SPSS to compare each of the nicotine treatments with control (i.e. low vs. control and high vs. control). Welch test correction was performed to account for unequal variance in each of the compared groups (control and treatment). In addition, to increase the statistical stringency, miRNAs differential expression was deemed significant only if it fulfilled two criteria: p value , 0.05 and expression changed by at least 50% relative to control. Description  miRNAs in F1 generation up regulated by exposure to 20uM and 20mM nicotine during F0 generation.
Primary Identifier  WBPaper00049006:nicotine_upregulated_F1

0 Anatomy Terms

18 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003264 mir-36 Y62F5A.3 Caenorhabditis elegans
WBGene00023452 mir-353 D1007.17 Caenorhabditis elegans
WBGene00003260 mir-1 T09B4.11 Caenorhabditis elegans
WBGene00050921 mir-1019 M04C9.8 Caenorhabditis elegans
WBGene00077719 mir-1828 T22A3.9 Caenorhabditis elegans
WBGene00194809 mir-2218.1 W09G3.10 Caenorhabditis elegans
WBGene00003354 mir-260 F39E9.13 Caenorhabditis elegans
WBGene00003329 mir-236 C52E12.7 Caenorhabditis elegans
WBGene00003313 mir-85 F49E12.11 Caenorhabditis elegans
WBGene00003294 mir-66 Y48G9A.15 Caenorhabditis elegans
WBGene00194822 mir-2208.1 Y55F3AM.16 Caenorhabditis elegans
WBGene00003336 mir-242 F36A4.16 Caenorhabditis elegans
WBGene00003351 mir-257 Y102A5D.4 Caenorhabditis elegans
WBGene00003356 mir-262 ZK384.5 Caenorhabditis elegans
WBGene00045343 mir-786 C39D10.12 Caenorhabditis elegans
WBGene00003348 mir-254 ZK455.9 Caenorhabditis elegans
WBGene00045327 mir-793 M03B6.6 Caenorhabditis elegans
WBGene00194840 mir-2212 R11.6 Caenorhabditis elegans

0 Life Stages

0 Processes

0 Regulated By Gene

1 Regulated By Molecule

Name Primary Identifier
nicotine WBMol:00001980