WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101364 Genotype  Pmyo-3::PABPN1-A13 (polyalanine expanded mutant of PABPN1 protein)::GFP [drives expression of nuclear localized GFP in body wall muscles]
Phenotype Remark  pop-1 RNAi enhanced the progressive loss of nuclear PABPN1-A13::GFP in body wall muscles (an indicator of muscle cell decline) Remark  (Figure 2D) pop-1 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004077 pop-1 W10C8.2 Caenorhabditis elegans
WBGene00220126 W10C8.17 W10C8.17 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10C8.2 W10C8.2 1317   I: 2823468-2823937

1 Laboratories

Primary Identifier
ID

2 Phenotype

Identifier Name Description
WBPhenotype:0001278 transgene expression reduced Any decrease in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0000550 body muscle dystrophy Progressive degeneration of muscle along the body wall.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036044

0 Strain