WormMine: Gene WBGene00220126

• WormBase Gene ID: WBGene00220126
• Gene Name: W10C8.17
• Sequence Name: W10C8.17
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by cep-1; dlc-1; and mrps-5 based on RNA-seq studies.
• Biotype: SO:0001267
• Genetic Position: :±
• Length (nt): 191

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00220126

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:W10C8.17	W10C8.17	191	I: 2826883-2827073

Other

0 CDSs

25 RNAi Result

• WBRNAi00101441
• WBRNAi00101387
• WBRNAi00101365
• WBRNAi00101364
• WBRNAi00101442
• WBRNAi00027738
• WBRNAi00101435
• WBRNAi00101437
• WBRNAi00101443
• WBRNAi00063079
• WBRNAi00022992
• WBRNAi00022993
• WBRNAi00101440
• WBRNAi00101371
• WBRNAi00101373
• WBRNAi00062634
• WBRNAi00101367
• WBRNAi00101369
• WBRNAi00101381
• WBRNAi00101380
• WBRNAi00101389
• WBRNAi00101391
• WBRNAi00101436
• WBRNAi00101438
• WBRNAi00101439

5 Allele

• gk963902
• gk964159
• gk962616
• gk314300
• gk325689

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00220126
• Start: 2826883
• End: 2827073
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that interact with 3xFLAG-DLC-1 as identified by immunoprecipitation followed by RNA sequencing.	DESeq2, fold change > 2,, p-value < 0.01	WBPaper00055334:DLC-1_interacting
	Transcripts that showed significantly decreased expression in mrps-5(RNAi) animals comparing to animals injected with empty vector.	Differential expression was assessed using a Partial least-squares discriminant analysis (PLS-DA) using mixomics setting a variable of importance (VIP) score of greater than 1 as significant.	WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_normal
	ncRNAs with significantly increased expression in cep-1(gk138) than in N2 after UV irradiation, according to RNAseq.	ncRNAs with more than 2 fold difference in expression are considered differentially expressed	WBPaper00045380:cep-1(gk138)_upregulated_UV

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00220126
• Start: 2826883
• End: 2827073
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 191

1 Sequence Ontology Term