WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00073457 Genotype  lin-35(n2239)
Phenotype Remark  RNAi phenotype was reproducibly stronger in lin-35, or in multiple synMuv B mutants, than in WT, rrf-3 and eri-1. Remark  Group of 5 interacting genes. Genes that showed an RNAi phenotype substantially stronger in lin-35(n2239) than in any other background.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1c F13B10.1c 2946   III: 3870183-3870268
CDS:F13B10.1a F13B10.1a 2793   III: 3870183-3870277
CDS:F13B10.1f F13B10.1f 2955   III: 3870183-3870277
CDS:F13B10.1g F13B10.1g 2784   III: 3870183-3870268
CDS:F13B10.1b F13B10.1b 1761   III: 3870183-3870268
CDS:F13B10.1d F13B10.1d 1032   III: 3870183-3870268
CDS:F13B10.1e F13B10.1e 2406   III: 3870183-3870277
CDS:F13B10.1h F13B10.1h 1041   III: 3870183-3870277

1 Laboratories

Primary Identifier
SV

4 Phenotype

Identifier Name Description
WBPhenotype:0000688 sterile Animals generate defective gametes, are otherwise unable to reproduce or they generate progeny that are unable to reproduce.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain