WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00073459 Genotype  eri-1(mg366)
Phenotype Remark  RNAi phenotype was reproducibly stronger in lin-35, or in multiple synMuv B mutants, than in WT, rrf-3 and eri-1. Remark  Group of 5 interacting genes. Genes that showed an RNAi phenotype substantially stronger in lin-35(n2239) than in any other background.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006575 tir-1 F13B10.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13B10.1c F13B10.1c 2946   III: 3870183-3870268
CDS:F13B10.1a F13B10.1a 2793   III: 3870183-3870277
CDS:F13B10.1f F13B10.1f 2955   III: 3870183-3870277
CDS:F13B10.1g F13B10.1g 2784   III: 3870183-3870268
CDS:F13B10.1b F13B10.1b 1761   III: 3870183-3870268
CDS:F13B10.1d F13B10.1d 1032   III: 3870183-3870268
CDS:F13B10.1e F13B10.1e 2406   III: 3870183-3870277
CDS:F13B10.1h F13B10.1h 1041   III: 3870183-3870277

1 Laboratories

Primary Identifier
SV

2 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000676 growth rate variant The increase in size or mass of an organism over time during the lifespan of the organism or over any developmental stage(s) is not similar to that observed for control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain