WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00085171 Genotype  unc-119(ed3) [opt-2::GFP::pgp-1, unc-119(+)]
Phenotype Remark  RNAi causes significant inhibition of Cry5B-induced endocytic response, as indicated by the PGP-1::GFP transgene Remark  Authors note that the rab-11.1 RNAi clone was a gift from Barth Grant. Ahringer clone used for curation. Authors also note that due to the sequence similarity with rab-11.2, this clone likely also knocks down levels of rab-11.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004274 rab-11.1 F53G12.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53G12.1 F53G12.1 636   I: 109265-109446

1 Laboratories

Primary Identifier
HY

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001422 endocytic transport defect Animals exhibit defects in the directed movement of substances into, out of or mediated by the endosome, a membrane-bound organelle that trafficks material to different compartments of the cell or back to the plasma membrane for recycling.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038144

0 Strain