WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53G12.1 Sequence Name  F53G12.1
Length (nt)  636   Chromosome Location  I: 109265-109446
Chromosome . Primary Identifier  I Chromosome Location . Start  109265
Chromosome Location . End  109446
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53G12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11006 RAB-11.1 23.4 211 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00101866
WBRNAi00107742
WBRNAi00085167
WBRNAi00085705
WBRNAi00004995
WBRNAi00003751
WBRNAi00088833
WBRNAi00085171
WBRNAi00085176
WBRNAi00081269
WBRNAi00083369
WBRNAi00083345
WBRNAi00093195
WBRNAi00032710
WBRNAi00112383
WBRNAi00077458
WBRNAi00048165
WBRNAi00116762
WBRNAi00091944
WBRNAi00112384
WBRNAi00112545
WBRNAi00085161
WBRNAi00085163
WBRNAi00085174
WBRNAi00077471
WBRNAi00091442
WBRNAi00081263
WBRNAi00081264
WBRNAi00115380
WBRNAi00116413

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53G12.1 109265 109446 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004274 rab-11.1 F53G12.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53G12.1 109265 109446 -1
CDS:F53G12.1 109492 109783 -1
CDS:F53G12.1 109835 109956 -1
CDS:F53G12.1 110005 110044 -1

1 Sequence

Length
636

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53G12.1.1 F53G12.1.1 1232   I: 108682-110057