WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00113628 Genotype  Pglr-1::lin-17(RNAi)
Phenotype Remark  AVG axon guidance defects resulted after cell-specific RNAi using the glr-1 promoter to express RNAi. Remark  Gene sequences placed under the glr-1 promoter to create cell-specific RNAi in the AVG neurons. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (Y71F9B.5a.1).
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.5a Y71F9B.5a 1677   I: 2707629-2707694
CDS:Y71F9B.5b Y71F9B.5b 1671   I: 2707629-2707694
CDS:Y71F9B.5c Y71F9B.5c 1473   I: 2709953-2710066

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00054981

0 Strain