WormMine: Gene WBGene00003006

• WormBase Gene ID: WBGene00003006
• Gene Name: lin-17
• Sequence Name: Y71F9B.5
• Brief Description: lin-17 encodes one of four C. elegans Frizzled homologs, integral membrane proteins that contain an external cysteine rich domain (CRD) and seven transmembrane domains and that function in a wide variety of species as receptors for Wnt glycoprotein signaling molecules; LIN-17 activity is required for specifying the polarity of a number of asymmetric cell divisions that, in C. elegans, are essential for development of such structures as the vulva, somatic gonad, and tail; LIN-17 is also required for the proper polarity of neuronal migrations along the anterior-posterior axis; genetic interactions indicate that LIN-17 likely functions as a receptor for several different Wnt molecules, including LIN-44 and EGL-20, and that in specifying cell fates, the LIN-17-mediated signaling pathway often functions redundantly with other signaling pathways, including the RTK/Ras pathway; LIN-17, along with CWN-2, CAM-1, and DSH-1, functions as part of a Wnt signaling pathway that regulates ACR-16 localization to postsynaptic regions, a key component of activity-dependent synaptic plasticity; a LIN-17 translational reporter fusion shows membrane-associated expression in all of the Pn.pxx vulval precursor cells, in the descendants of V6 and T in males, in the P11.p and B cells, as well as their daughters, and granddaughters, and weakly in P10.p and its daughters; the reporter fusion does not reveal expression in P7.p, Z1, Z4, and T; LIN-17 is also expressed in muscle arms, where it colocalizes with CAM-1.
• Organism: Caenorhabditis elegans
• Automated Description: Enables receptor tyrosine kinase binding activity. Involved in several processes, including axis specification; cell differentiation; and sex differentiation. Located in neuron projection membrane. Expressed in several structures, including P3.p male; P4.p male; PQR; epithelial cell; and male-specific anatomical entity.
• Biotype: SO:0001217
• Genetic Position: I :-7.32492 ±0.04152
• Length (nt): 10667

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00003006

Genomics

5 Transcripts

Class	WormMine ID	Sequence Name	Length (nt)	Chromosome Location
MRNA	Transcript:Y71F9B.5a.2	Y71F9B.5a.2	2198	I: 2706883-2717549
MRNA	Transcript:Y71F9B.5b.1	Y71F9B.5b.1	1906	I: 2707598-2717549
MRNA	Transcript:Y71F9B.5a.1	Y71F9B.5a.1	1894	I: 2707599-2717542
NcPrimaryTranscript	Transcript:Y71F9B.5d	Y71F9B.5d	1497	I: 2709919-2717345
MRNA	Transcript:Y71F9B.5c.1	Y71F9B.5c.1	1473	I: 2709953-2717355

Other

3 CDSs

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
CDS:Y71F9B.5a	Y71F9B.5a	1677	I: 2707629-2707694
CDS:Y71F9B.5b	Y71F9B.5b	1671	I: 2707629-2707694
CDS:Y71F9B.5c	Y71F9B.5c	1473	I: 2709953-2710066

9 RNAi Result

• WBRNAi00101396
• WBRNAi00058182
• WBRNAi00037782
• WBRNAi00101449
• WBRNAi00113628
• WBRNAi00094915
• WBRNAi00098854
• WBRNAi00101347
• WBRNAi00101480

234 Allele

• gk963902
• gk964159
• gk962616
• gk964303
• rh75
• rh71
• sy277
• WBVar01712787
• WBVar01712785
• WBVar01712786
• rh41
• otn1134
• otn1133
• mn589
• gk105799
• gk105800
• gk105801
• gk105802
• gk105795
• WBVar01981982
• gk105796
• WBVar01981981
• gk105797
• gk105798
• WBVar01981983
• WBVar01640749
• gk105807
• WBVar01640750
• gk105808
• WBVar01640751

1 Chromosome

• WormBase ID: I
• Organism: Caenorhabditis elegans
• Length (nt): 15072434

1 Chromosome Location

• Feature . Primary Identifier: WBGene00003006
• Start: 2706883
• End: 2717549
• Strand: 1

4 Data Sets

• WormBaseAcedbConverter
• GO Annotation data set
• C. elegans genomic annotations (GFF3 Gene)
• Panther orthologue and paralogue predictions

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrI_2717550..2718026
• Length (nt): 477
• Chromosome Location: I: 2717550-2718026
• Organism: Caenorhabditis elegans

187 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in L1 neural cells comparing to in adult neural cells.	DESeq2 (v1.18.1) fold change > 2, P-adj<0.05, using BenjaminiHochberg correction.	WBPaper00060811:L1_vs_adult_upregulated_neural
	Transcripts expressed in neuronal cells, by analyzingfluorescence-activated cell sorted (FACS) neurons.	DESeq. False discovry rate (FDR) < 0.1.	WBPaper00048988:neuron_expressed
adult vs dauer larva	Transcripts that showed differential expression in adult vs dauer lava in N2 animals at 20C.	N.A.	WBPaper00050488:adult_vs_dauer_regulated_N2_20C
	mRNAs that showed decreased expression in 1 cell mebryo comparing to in oocyte, according to RNAseq analysis.	Gaussian error propagation. As cutoff for the up-regulated genes authors used log2 fold change > 1 and P < 0.05 and as cutoff for the down-regulated genes authors used log2 fold change < -1 and P < 0.05.	WBPaper00045420:fertilization_downregulated_transcript
	Genes that showed increased expression in wdr-5(ok1417) comparing with in N2.	Statistical analysis for misexpression was performed using a moderated t test from the package limma. All genes with a false discovery rate (FDR) of <= 5% (p <= 0.05) were selected as differentially regulated.	WBPaper00045861:wdr-5(ok1417)_upregulated
	Transcripts that showed significantly higher expression in somatic gonad precursor cells (SGP) vs. head mesodermal cells (hmc).	DESeq2, fold change >= 2, FDR <= 0.01.	WBPaper00056826:SGP_biased
	Transcripts expressed in the epithelial tissues surrounding the pharynx that includes the arcade and intestinal valve (AIV) cells, according to PAT-Seq analysis using Pbath-15-GFP-3XFLAG mRNA tagging.	Cufflinks FPKM value >=1.	WBPaper00050990:arcade_intestinal-valve_expressed
	Transcripts that showed significantly decreased expression in atfs-1(cmh15) (null allele) animals comparing to in N2 animals at L4 larva stage.	edgeR, fold change > 2, FDR < 0.05	WBPaper00060909:atfs-1(cmh15)_downregulated
	Transcripts expressed in intestine, according to PAT-Seq analysis using Pges-1-GFP-3XFLAG mRNA tagging.	Cufflinks FPKM value >=1.	WBPaper00050990:intestine_expressed
	Genes with expression level regulated by genotype (N2 vs CB4856) and age at old adults stage (214 hours at 24 centigrade).	For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR).	WBPaper00040858:eQTL_age_regulated_aging
	Genes with expression level regulated by genotype (N2 vs CB4856) at old adults stage (214 hours at 24 centigrade).	For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR).	WBPaper00040858:eQTL_regulated_aging
	Genes with expression level regulated by genotype (N2 vs CB4856) at L3 larva and Late reproduction stage (96 hours at 24 centigrade).	For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR).	WBPaper00040858:eQTL_regulated_developing
	Transcripts that showed significantly decreased expression in day 3 adult hermaphrodite comparing to in L4 larva daf-16(mu86);glp-1(e2141) animals.	Fold change > 2, FDR < 0.05	WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
	Transcripts that showed significantly decreased expression in day 3 adult hermaphrodite comparing to in L4 larva glp-1(e2141) animals.	Fold change > 2, FDR < 0.05	WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
	Transcripts that showed significantly increased expression after four-day-old young adult worms were placed on NGM plates seeded with OP50 in the presence 5% Agaro-oligosaccharides(AGO) for 24 h, comparing to animals grown in the absence of AGO.	Fold change > 2.	WBPaper00064306:Agaro-oligosaccharides_upregulated
	Transcripts that showed significantly increased expression in sin-3(tm1276) comparing to in N2.	DESeq2, fold change > 2, p-value < 0.01.	WBPaper00061203:sin-3(tm1276)_upregulated
	Maternal class (M): genes that are called present in at least one of the three PC6 replicates.	A modified Welch F statistic was used for ANOVA. For each gene, regressed error estimates were substituted for observed error estimates. The substitution is justified by the lack of consistency among the most and least variable genes at each time point. Regressed error estimates were abundance-dependent pooled error estimates that represented a median error estimate from a window of genes of similar abundance to the gene of interest. A randomization test was used to compute the probability Pg of the observed F statistic for gene g under the null hypothesis that developmental time had no effect on expression. P-values were not corrected for multiple testing.	[cgc5767]:expression_class_M
	Transcripts that showed significantly increased expression in aak-1(tm1944);aak-2(ok524) animals comparing to in N2.	DEseq 1.18.0, adjusted p-value < 0.05.	WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
	Genes that showed significantly increased expression in daf-2(e1370);hel-1(gk148684) comparing to in hel-1(gk148684)	To identify DEGs, Students t test and the log2 median ratio test were performed to compute t values and median ratios for all the annotated genes. The adjusted P values from each test were computed using an empirical distribution of the null hypothesis, which was obtained from random permutations of the samples. Finally, the adjusted P values from the individual tests were combined to compute the overall P values using Stouffers method , and genes with overall P < 0.05 and fold change > 1.5 were selected as DEGs.	WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
	Transcripts that showed significantly decreased expression in N2 animals exposed to 0.1mM Paraquat from hatching to reaching adult stage.	DESeq2 version 1.22.2, p < 0.05	WBPaper00064716:paraquat_downregulated
	Significantly upregulated genes from clk-1(qm30) microarrays using SAM algorithm with an FDR < 0.1 from adult-only chips.	SAM algorithm with an FDR < 0.1.	WBPaper00033065:clk-1(qm30)_upregulated
	Transcripts that showed significantly decreased expression in sin-3(tm1276) comparing to in N2 at early embryo when there were only 3 -5 eggs in the adult.	DESeq2, fold change > 2, adjusted p-value < 0.01	WBPaper00058598:sin-3(tm1276)_downregulated
Gamma irradiation 100 mGY per hour for 72 hours since L1 larva.	Transcripts that showed significantly increased expression after exposure to 100mGy per hour gamma irradiation from L1 to day 1 adult hermaphrodite stage.	DESeq2, FDR <= 0.05, log2 fold change >= 0.3 or <= -0.3.	WBPaper00058958:100mGy-irradiation-72h_upregulated
	Genes that showed expression levels higher than the corresponding reference sample (L2 all cell reference).	A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes.	WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
	Genes that showed expression levels higher than the corresponding reference sample (L2 all cell reference).	A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes.	WBPaper00037950:all-neurons_L2-larva_expressed
	Transcripts that showed significantly increased expression in hpk-1(pk1393) comparing to in N2 at adult day 2.	DESeq 2, fold change > 2, FDR < 0.05.	WBPaper00065581:hpk-1(pk1393)_upregulated
	Transcripts that showed significantly increased expression in hda-1[KKRR]-smo-1 in gonads dissected from 1-day old adult animals.	Salmon was used to map the mRNA-seq reads with the worm database WS268, and its output files were imported to DESeq2 in R. The differentially expressed genes were filtered by fold change more than 2 and adjusted p-value < 0.05. The scatter plots were generated by the plot function in R.	WBPaper00061479:hda-1(ne4748)_upregulated
	Transcripts that showed significantly increased expression in hda-1(ne4752[3xFLAG-Degron-HDA-1]) in gonads dissected from 1-day old adult animals.	Salmon was used to map the mRNA-seq reads with the worm database WS268, and its output files were imported to DESeq2 in R. The differentially expressed genes were filtered by fold change more than 2 and adjusted p-value < 0.05. The scatter plots were generated by the plot function in R.	WBPaper00061479:hda-1(ne4752)_upregulated
	Transcripts that showed significantly increased expression in mep-1(ne4629[MEP-1-GFP-Degron]) in gonads dissected from 1-day old adult animals.	Salmon was used to map the mRNA-seq reads with the worm database WS268, and its output files were imported to DESeq2 in R. The differentially expressed genes were filtered by fold change more than 2 and adjusted p-value < 0.05. The scatter plots were generated by the plot function in R.	WBPaper00061479:mep-1(ne4629)_upregulated
	Genes that showed expression levels higher than the corresponding reference sample (L2 all cell reference).	A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes.	WBPaper00037950:excretory-cell_L2-larva_expressed

21 Expression Patterns

• Primary Identifier: Expr4251
• Remark: mhIs9 rescued the lin-17 T and B cell polarity defects.
• Pattern: mhIs9 males contain a lin-17::gfp construct that was expressed in the membranes of the T, B cells and their descendants as well as the F, P11, P12 and vuval precursor cells.
• Subcellular Localization: membrane

• Primary Identifier: Expr4500
• Pattern: Expression observed in B, B.a and B.p.
• Subcellular Localization: Asymmetric localization occurs when the amount of protein, as detected by GFP intensity, varies within a cell, while asymmetric distribution occurs when the levels of protein as detected by relative GFP intensity differ between the B.a and B.p daughters. Prior to division, LIN-17::GFP accumulated asymmetrically to the anterior cortex and cytoplasm of the B cell in 81% of males (n = 31). After division, LIN-17::GFP was symmetrically localized within the B.a cell cortex, but was asymmetrically localized within the B.p cell in 76% (n = 33) of males, with the anterior membrane and cytoplasm displaying a higher level of LIN-17::GFP than the posterior. The asymmetric localization of LIN-17::GFP to the anterior cortex and cytoplasm of the B and B.p cells was confirmed by 1-um Z sections through the B cell.

• Primary Identifier: Expr1031401
• Pattern: Tiling arrays expression graphs

• Primary Identifier: Expr10753
• Reporter Gene: [lin-17::tagRFP] translational fusion was generated from lin-17::gfp (Wu and Herman, 2006).
• Pattern: LIN-17::tagRFP was present in the cell body and neurites of the VD neurons. LIN-17::tagRFP was also present in other parts of the animal including neurons, muscles and epithelium

• Primary Identifier: Expr1569
• Pattern: Weak expression of lin-17 detected in the vulva cells that form the vulva only after the vulva precursor cells had divided twice, i.e., in all Pn.pxx cells. lin-17 expression was also observed in the male tail throughout development, with the expression strong particularly at later L3 stage in most descendants of the V6 and T cells in the lateral hypodermis. lin-17 was detected in the P11.p and B cells. This expression was almost uniform around the cell surface prior to their asymmetric divisions. Lin-17 was also detected in both daughters and all the granddaughter cells of the P11.p and B cells. Expression in the daughter cells were also uniform around the cells. In addition, weak lin-17 expression was detected in the P10.p cell and both of its daughter cells. Authors failed to detect lin-17 expression in P7.p, Z1, Z4 and T cells.
• Subcellular Localization: Expressed on cell membrane.

• Primary Identifier: Expr12879
• Pattern: lin-17/Frizzled::GFP reporter is expressed in the linker cell.

• Primary Identifier: Expr1022074
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012

• Primary Identifier: Expr9702
• Pattern: LIN-17 is expressed in the PQR neuron.

• Primary Identifier: Expr12037
• Pattern: During the early L3 stage, lin-17::GFP was expressed predominantly in P11.p and was barely detectable in P10.p. No expression was detected in P9.p. Subsequently, descendants of both P10.p and P11.p expressed lin- 17::GFP, with slightly higher levels in the P11.p descendants.

• Primary Identifier: Expr11645
• Pattern: lin-17p::LIN-17::GFP is also expressed in all V cells.

• Primary Identifier: Expr2013163
• Pattern: Single cell embryonic expression. Only cell types with an expression fraction of greater 0.2 of the maximum expressed fraction are labeled (Full data can be downloaded from http://caltech.wormbase.org/pub/wormbase/datasets-published/packer2019/). The colors represent the broad cell class to which the cell type has been assigned. The size of the point is proportional to the log2 of the numbers of cells in the dataset of that cell type. Interactive visualizations are available as a web app (https://cello.shinyapps.io/celegans/) and can also be installed as an R package (https://github.com/qinzhu/VisCello.celegans).

• Primary Identifier: Expr11844
• Pattern: GFP-tagged LIN-17 is expressed in the DTCs throughout development.

• Primary Identifier: Expr10002
• Subcellular Localization: LIN-17 and CAM-1 are expressed in muscle arms of transgenic worms and partially colocalized, suggesting that LIN-17 and CAM-1 might associate in muscle arms.

• Primary Identifier: Expr3050
• Remark: Reporter gene fusion type not specified.
• Pattern: The expression of the lin-17 gene was analyzed using a reporter in which a nuclear localized variant of GFP was expressed under the control of the lin-17 promoter. This construct expressed GFP in VPCs P5.p, P6.p, and P7.p, their daughters, and granddaughters, and was coexpressed with lin-18::DsRed2 (full-length LIN-18::DsRed2 fusion under the control of the lin-18 promoter). Thus, LIN-17 and LIN-18 proteins are likely present in the same cells during vulval development.

• Primary Identifier: Expr14920
• Subcellular Localization: We therefore examined the subcellular localization of the LIN-17::GFP fusion protein during PDB posterior neurite pruning. We observed significantly higher accumulation of LIN-17::GFP puncta at the tip of the posterior neurites compared with those at the anterior neurite at L2 stage.

• Primary Identifier: Expr2031395
• Pattern: Single cell embryonic expression. Only cell types with an expression fraction of greater 0.2 of the maximum expressed fraction are labeled (Full data can be downloaded from http://caltech.wormbase.org/pub/wormbase/datasets-published/packer2019/). The colors represent the broad cell class to which the cell type has been assigned. The size of the point is proportional to the log2 of the numbers of cells in the dataset of that cell type. Interactive visualizations are available as a web app (https://cello.shinyapps.io/celegans/) and can also be installed as an R package (https://github.com/qinzhu/VisCello.celegans).

• Primary Identifier: Expr11484
• Subcellular Localization: When expressed in the mechanosensory neurons, LIN-17 is highly enriched at the plasma membrane.

• Primary Identifier: Expr13839
• Subcellular Localization: LIN-17::GFP is localized to the growing axon tip of AVG.

• Primary Identifier: Expr3849
• Subcellular Localization: C-terminally-tagged LIN-17::mRFP1 fusion protein was able to rescue most of the PLM defects of lin-17 mutants. In these rescued animals, and in wild-type animals expressing a lin-17::mRFP1 transgene, LIN-17::mRFP1 was enriched in the PLM posterior process; in some cases, it also capped the posterior side of the PLM cell body. The posterior PLM process consistently expressed about three times as much LIN-17::mRFP1 per unit area as the anterior process.

• Primary Identifier: Expr13948
• Subcellular Localization: In wild-type worms, Fz/LIN-17::YFP (wyEx677) localizes primarily to intracellular puncta in the asynaptic region of the DA9 axon. A barely detectable diffuse component can sometimes be seen in the synaptic region.

• Primary Identifier: Expr1161601
• Pattern: Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015

55 GO Annotation

3 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00003006
• Start: 2706883
• End: 2717549
• Strand: 1

55 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 10667

1 Sequence Ontology Term

• Name: gene

18 Strains

• WBStrain00024033
• WBStrain00026967
• WBStrain00026829
• WBStrain00026835
• WBStrain00026852
• WBStrain00026855
• WBStrain00027350
• WBStrain00027093
• WBStrain00027149
• WBStrain00029439
• WBStrain00030926
• WBStrain00030834
• WBStrain00032306
• WBStrain00008500
• WBStrain00008502
• WBStrain00008495
• WBStrain00008499
• WBStrain00004335

1 Upstream Intergenic Region

• WormBase ID: intergenic_region_chrI_2703459..2706882
• Length (nt): 3424
• Chromosome Location: I: 2703459-2706882
• Organism: Caenorhabditis elegans