WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y71F9B.5a Sequence Name  Y71F9B.5a
Length (nt)  1677   Chromosome Location  I: 2707629-2707694
Chromosome . Primary Identifier  I Chromosome Location . Start  2707629
Chromosome Location . End  2707694
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y71F9B.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE25569 LIN-17, isoform a 62.2 558 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00101396
WBRNAi00058182
WBRNAi00037782
WBRNAi00101449
WBRNAi00113628
WBRNAi00094915
WBRNAi00098854
WBRNAi00101347
WBRNAi00101480

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y71F9B.5a 2707629 2707694 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y71F9B.5a 2707629 2707694 1
CDS:Y71F9B.5a 2708102 2708206 1
CDS:Y71F9B.5a 2709920 2710066 1
CDS:Y71F9B.5a 2711121 2711405 1
CDS:Y71F9B.5a 2712439 2712548 1
CDS:Y71F9B.5a 2713851 2714072 1
CDS:Y71F9B.5a 2714120 2714408 1
CDS:Y71F9B.5a 2714728 2715054 1
CDS:Y71F9B.5a 2717230 2717355 1

1 Sequence

Length
1677

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y71F9B.5a.2 Y71F9B.5a.2 2198   I: 2706883-2717549
Transcript:Y71F9B.5a.1 Y71F9B.5a.1 1894   I: 2707599-2717542