WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101347 Genotype  Pmyo-3::PABPN1-A13 (polyalanine expanded mutant of PABPN1 protein)::GFP [drives expression of nuclear localized GFP in body wall muscles]
Phenotype Remark  lin-17 RNAi suppressed the progressive loss of nuclear PABPN1-A13::GFP in body wall muscles (an indicator of muscle cell decline) Remark  (Figure 1B) lin-17 RNAi
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003006 lin-17 Y71F9B.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.5a Y71F9B.5a 1677   I: 2707629-2707694
CDS:Y71F9B.5b Y71F9B.5b 1671   I: 2707629-2707694
CDS:Y71F9B.5c Y71F9B.5c 1473   I: 2709953-2710066

1 Laboratories

Primary Identifier
ID

2 Phenotype

Identifier Name Description
WBPhenotype:0001236 transgene expression increased Any increase in the intensity of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001292 body wall muscle physiology variant Animals exhibit variations in any physical or chemical process required for cells as a collective unit of the body wall muscle system to carry out their normal functions or activities or be able to perceive and respond to stimuli, compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036044

0 Strain