WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086289 Phenotype Remark  Some (3%) of lin-42 RNAi animals exhibit a distal tip cell migration defect whereby the distal tip cell, after the dorsal turn, migrates distally instead of proximally
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429

1 Laboratories

Primary Identifier
RG

1 Phenotype

Identifier Name Description
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028283

0 Strain