WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101491 Genotype  wIs78 [SCMp::GFP marker transgene for seam cells]
Phenotype Remark  lin-42 RNAi resulted in a modest reduction in the number of seam cells only during the L4 larval stage Remark  (Figure 3D) lin-42 RNAi. Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429
CDS:F47F6.1g F47F6.1g 297   II: 1234175-1234429

1 Laboratories

Primary Identifier
CT

1 Phenotype

Identifier Name Description
WBPhenotype:0001923 fewer seam cells The population of the lateral, alae-producing epithelial cells (seam cells) is reduced compared to control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00037838

0 Strain