WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086617 Phenotype Remark  Gonad arms reflex prematurely at the L2 molt

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018572 lin-42 F47F6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47F6.1e F47F6.1e 1011   II: 1234175-1234429
CDS:F47F6.1a F47F6.1a 894   II: 1234175-1234429
CDS:F47F6.1b F47F6.1b 1794   II: 1234175-1234429
CDS:F47F6.1d F47F6.1d 1965   II: 1234175-1234429
CDS:F47F6.1g F47F6.1g 297   II: 1234175-1234429

1 Laboratories

Primary Identifier
AA

1 Phenotype

Identifier Name Description
WBPhenotype:0001494 distal tip cell migration precocious DTCs migrate at an earlier stage of development, compared to control.

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000396 non reflexed gonad arms Gonadal arms do not bend or curve. In C. elegans gonad arms normally reflex to form a stereotypical U-shaped pattern.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029151

1 Strain

WormBase ID
WBStrain00000001